Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.13■□□□□ 0.17
CAPNS1P04632 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.13■□□□□ 0.17
CAPNS1P04632 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.13■□□□□ 0.17
CAPNS1P04632 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPNS1P04632 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.13■□□□□ 0.17
CAPNS1P04632 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CAPNS1P04632 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.13■□□□□ 0.17
CAPNS1P04632 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CAPNS1P04632 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPNS1P04632 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPNS1P04632 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPNS1P04632 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CAPNS1P04632 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CAPNS1P04632 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPNS1P04632 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.13■□□□□ 0.17
CAPNS1P04632 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CAPNS1P04632 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPNS1P04632 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.13■□□□□ 0.17
CAPNS1P04632 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.13■□□□□ 0.17
CAPNS1P04632 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.13■□□□□ 0.17
CAPNS1P04632 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPNS1P04632 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPNS1P04632 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.13■□□□□ 0.17
CAPNS1P04632 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPNS1P04632 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CAPNS1P04632 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.13■□□□□ 0.17
CAPNS1P04632 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPNS1P04632 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CAPNS1P04632 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CAPNS1P04632 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPNS1P04632 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
CAPNS1P04632 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPNS1P04632 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.12■□□□□ 0.17
CAPNS1P04632 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.12■□□□□ 0.17
CAPNS1P04632 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CAPNS1P04632 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPNS1P04632 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
CAPNS1P04632 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CAPNS1P04632 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CAPNS1P04632 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CAPNS1P04632 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CAPNS1P04632 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPNS1P04632 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.12■□□□□ 0.17
CAPNS1P04632 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CAPNS1P04632 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPNS1P04632 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CAPNS1P04632 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
CAPNS1P04632 AC138969.3-201ENST00000546612 1459 ntBASIC16.12■□□□□ 0.17
CAPNS1P04632 AC138932.2-201ENST00000548268 1459 ntBASIC16.12■□□□□ 0.17
CAPNS1P04632 AC126755.4-201ENST00000549796 1459 ntBASIC16.12■□□□□ 0.17
CAPNS1P04632 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CAPNS1P04632 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.12■□□□□ 0.17
CAPNS1P04632 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPNS1P04632 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPNS1P04632 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.12■□□□□ 0.17
CAPNS1P04632 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
CAPNS1P04632 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.12■□□□□ 0.17
CAPNS1P04632 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.12■□□□□ 0.17
CAPNS1P04632 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.12■□□□□ 0.17
CAPNS1P04632 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.12■□□□□ 0.17
CAPNS1P04632 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.12■□□□□ 0.17
CAPNS1P04632 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.12■□□□□ 0.17
CAPNS1P04632 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.12■□□□□ 0.17
CAPNS1P04632 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.12■□□□□ 0.17
CAPNS1P04632 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.12■□□□□ 0.17
CAPNS1P04632 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.12■□□□□ 0.17
CAPNS1P04632 AL161645.1-201ENST00000622716 1255 ntBASIC16.12■□□□□ 0.17
CAPNS1P04632 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.12■□□□□ 0.17
CAPNS1P04632 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPNS1P04632 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.12■□□□□ 0.17
CAPNS1P04632 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.12■□□□□ 0.17
CAPNS1P04632 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.12■□□□□ 0.17
CAPNS1P04632 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPNS1P04632 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.12■□□□□ 0.17
CAPNS1P04632 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPNS1P04632 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CAPNS1P04632 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.12■□□□□ 0.17
CAPNS1P04632 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPNS1P04632 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPNS1P04632 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CAPNS1P04632 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPNS1P04632 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CAPNS1P04632 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPNS1P04632 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.12■□□□□ 0.17
CAPNS1P04632 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPNS1P04632 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CAPNS1P04632 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPNS1P04632 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPNS1P04632 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPNS1P04632 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CAPNS1P04632 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPNS1P04632 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CAPNS1P04632 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPNS1P04632 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CAPNS1P04632 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.11■□□□□ 0.17
CAPNS1P04632 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CAPNS1P04632 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CAPNS1P04632 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CAPNS1P04632 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.11■□□□□ 0.17
CAPNS1P04632 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms