Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 AC009078.2-202ENST00000463353 338 ntBASIC14.63□□□□□ -0.07
HLA-DPB1P04440 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.63□□□□□ -0.07
HLA-DPB1P04440 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 OR2I1P-210ENST00000642037 4691 ntBASIC14.63□□□□□ -0.07
HLA-DPB1P04440 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HLA-DPB1P04440 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DPB1P04440 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.62□□□□□ -0.07
HLA-DPB1P04440 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.62□□□□□ -0.07
HLA-DPB1P04440 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.62□□□□□ -0.07
HLA-DPB1P04440 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.62□□□□□ -0.07
HLA-DPB1P04440 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
HLA-DPB1P04440 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DPB1P04440 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.62□□□□□ -0.07
HLA-DPB1P04440 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.62□□□□□ -0.07
HLA-DPB1P04440 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DPB1P04440 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DPB1P04440 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.62□□□□□ -0.07
HLA-DPB1P04440 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DPB1P04440 ELK2BP-201ENST00000415014 1224 ntBASIC14.62□□□□□ -0.07
HLA-DPB1P04440 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.62□□□□□ -0.07
HLA-DPB1P04440 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DPB1P04440 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.62□□□□□ -0.07
HLA-DPB1P04440 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.62□□□□□ -0.07
HLA-DPB1P04440 AC012640.2-201ENST00000561606 901 ntBASIC14.62□□□□□ -0.07
HLA-DPB1P04440 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
HLA-DPB1P04440 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
HLA-DPB1P04440 AC006557.2-201ENST00000592985 1240 ntBASIC14.62□□□□□ -0.07
HLA-DPB1P04440 AL049840.3-201ENST00000602669 611 ntBASIC14.62□□□□□ -0.07
HLA-DPB1P04440 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DPB1P04440 AL773604.1-201ENST00000617417 272 ntBASIC14.62□□□□□ -0.07
HLA-DPB1P04440 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DPB1P04440 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DPB1P04440 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.62□□□□□ -0.07
HLA-DPB1P04440 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DPB1P04440 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.62□□□□□ -0.07
HLA-DPB1P04440 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DPB1P04440 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.62□□□□□ -0.07
HLA-DPB1P04440 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.62□□□□□ -0.07
HLA-DPB1P04440 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DPB1P04440 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
HLA-DPB1P04440 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DPB1P04440 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
HLA-DPB1P04440 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.62□□□□□ -0.07
HLA-DPB1P04440 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DPB1P04440 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HLA-DPB1P04440 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
HLA-DPB1P04440 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPB1P04440 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPB1P04440 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPB1P04440 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPB1P04440 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.61□□□□□ -0.07
HLA-DPB1P04440 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPB1P04440 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.61□□□□□ -0.07
HLA-DPB1P04440 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.61□□□□□ -0.07
HLA-DPB1P04440 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPB1P04440 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPB1P04440 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPB1P04440 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPB1P04440 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.61□□□□□ -0.07
HLA-DPB1P04440 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPB1P04440 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPB1P04440 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPB1P04440 PTCHD3P3-201ENST00000403073 906 ntBASIC14.61□□□□□ -0.07
HLA-DPB1P04440 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.61□□□□□ -0.07
HLA-DPB1P04440 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPB1P04440 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.61□□□□□ -0.07
HLA-DPB1P04440 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPB1P04440 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HLA-DPB1P04440 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.61□□□□□ -0.07
HLA-DPB1P04440 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms