Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TUBB4AP04350 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TUBB4AP04350 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.39■□□□□ 0.37
TUBB4AP04350 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.39■□□□□ 0.37
TUBB4AP04350 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.39■□□□□ 0.37
TUBB4AP04350 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.39■□□□□ 0.37
TUBB4AP04350 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.39■□□□□ 0.37
TUBB4AP04350 AL445228.2-201ENST00000605589 952 ntBASIC17.39■□□□□ 0.37
TUBB4AP04350 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TUBB4AP04350 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TUBB4AP04350 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TUBB4AP04350 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TUBB4AP04350 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TUBB4AP04350 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TUBB4AP04350 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TUBB4AP04350 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TUBB4AP04350 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TUBB4AP04350 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TUBB4AP04350 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
TUBB4AP04350 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.39■□□□□ 0.37
TUBB4AP04350 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TUBB4AP04350 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TUBB4AP04350 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TUBB4AP04350 NCF1C-201ENST00000438382 1427 ntBASIC17.38■□□□□ 0.37
TUBB4AP04350 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB4AP04350 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB4AP04350 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB4AP04350 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB4AP04350 AC092127.1-201ENST00000567093 3455 ntBASIC17.38■□□□□ 0.37
TUBB4AP04350 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
TUBB4AP04350 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TUBB4AP04350 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TUBB4AP04350 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB4AP04350 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.38■□□□□ 0.37
TUBB4AP04350 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB4AP04350 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB4AP04350 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TUBB4AP04350 CICP4-201ENST00000447359 2812 ntBASIC17.38■□□□□ 0.37
TUBB4AP04350 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB4AP04350 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB4AP04350 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TUBB4AP04350 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB4AP04350 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB4AP04350 AK4P3-201ENST00000418260 669 ntBASIC17.38■□□□□ 0.37
TUBB4AP04350 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TUBB4AP04350 KRT18P38-201ENST00000449496 1282 ntBASIC17.38■□□□□ 0.37
TUBB4AP04350 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB4AP04350 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.38■□□□□ 0.37
TUBB4AP04350 KRT18P35-201ENST00000510488 1269 ntBASIC17.38■□□□□ 0.37
TUBB4AP04350 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.38■□□□□ 0.37
TUBB4AP04350 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.38■□□□□ 0.37
TUBB4AP04350 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.38■□□□□ 0.37
TUBB4AP04350 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TUBB4AP04350 AC006011.2-201ENST00000621313 1158 ntBASIC17.38■□□□□ 0.37
TUBB4AP04350 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.38■□□□□ 0.37
TUBB4AP04350 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.38■□□□□ 0.37
TUBB4AP04350 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB4AP04350 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC17.38■□□□□ 0.37
TUBB4AP04350 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TUBB4AP04350 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB4AP04350 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TUBB4AP04350 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB4AP04350 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TUBB4AP04350 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB4AP04350 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TUBB4AP04350 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC17.38■□□□□ 0.37
TUBB4AP04350 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB4AP04350 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB4AP04350 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB4AP04350 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBB4AP04350 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
TUBB4AP04350 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.38■□□□□ 0.37
TUBB4AP04350 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBB4AP04350 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBB4AP04350 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBB4AP04350 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TUBB4AP04350 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC17.37■□□□□ 0.37
TUBB4AP04350 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBB4AP04350 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TUBB4AP04350 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.37■□□□□ 0.37
TUBB4AP04350 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TUBB4AP04350 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TUBB4AP04350 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC17.37■□□□□ 0.37
TUBB4AP04350 AC104581.4-201ENST00000623126 3052 ntBASIC17.37■□□□□ 0.37
TUBB4AP04350 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBB4AP04350 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TUBB4AP04350 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TUBB4AP04350 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBB4AP04350 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBB4AP04350 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TUBB4AP04350 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.37■□□□□ 0.37
TUBB4AP04350 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBB4AP04350 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBB4AP04350 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBB4AP04350 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.37■□□□□ 0.37
TUBB4AP04350 AC087163.2-201ENST00000457299 853 ntBASIC17.37■□□□□ 0.37
TUBB4AP04350 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.37■□□□□ 0.37
TUBB4AP04350 AL160237.2-201ENST00000556165 472 ntBASIC17.37■□□□□ 0.37
TUBB4AP04350 AC139887.4-201ENST00000607877 719 ntBASIC17.37■□□□□ 0.37
TUBB4AP04350 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms