Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.65■□□□□ 0.42
VTNP04004 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VTNP04004 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VTNP04004 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VTNP04004 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.65■□□□□ 0.42
VTNP04004 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VTNP04004 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VTNP04004 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VTNP04004 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VTNP04004 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.64■□□□□ 0.42
VTNP04004 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
VTNP04004 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.64■□□□□ 0.42
VTNP04004 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.64■□□□□ 0.41
VTNP04004 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
VTNP04004 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.64■□□□□ 0.41
VTNP04004 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VTNP04004 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.64■□□□□ 0.41
VTNP04004 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VTNP04004 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VTNP04004 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VTNP04004 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.64■□□□□ 0.41
VTNP04004 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.64■□□□□ 0.41
VTNP04004 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.64■□□□□ 0.41
VTNP04004 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.64■□□□□ 0.41
VTNP04004 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VTNP04004 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.64■□□□□ 0.41
VTNP04004 AC055876.2-201ENST00000531834 546 ntBASIC17.64■□□□□ 0.41
VTNP04004 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
VTNP04004 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.64■□□□□ 0.41
VTNP04004 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.64■□□□□ 0.41
VTNP04004 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.64■□□□□ 0.41
VTNP04004 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VTNP04004 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VTNP04004 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VTNP04004 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
VTNP04004 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VTNP04004 AC092364.2-201ENST00000596710 2692 ntBASIC17.64■□□□□ 0.41
VTNP04004 CU639417.3-201ENST00000624240 1404 ntBASIC17.64■□□□□ 0.41
VTNP04004 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VTNP04004 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VTNP04004 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VTNP04004 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.63■□□□□ 0.41
VTNP04004 AL662844.4-201ENST00000606367 2838 ntBASIC17.63■□□□□ 0.41
VTNP04004 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VTNP04004 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
VTNP04004 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VTNP04004 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VTNP04004 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
VTNP04004 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
VTNP04004 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.63■□□□□ 0.41
VTNP04004 AC134407.2-201ENST00000625089 1978 ntBASIC17.63■□□□□ 0.41
VTNP04004 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
VTNP04004 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
VTNP04004 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VTNP04004 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VTNP04004 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.63■□□□□ 0.41
VTNP04004 AC092337.1-201ENST00000568699 1129 ntBASIC17.63■□□□□ 0.41
VTNP04004 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.63■□□□□ 0.41
VTNP04004 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.63■□□□□ 0.41
VTNP04004 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.63■□□□□ 0.41
VTNP04004 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
VTNP04004 LINC01115-203ENST00000606068 577 ntBASIC17.63■□□□□ 0.41
VTNP04004 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.63■□□□□ 0.41
VTNP04004 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.63■□□□□ 0.41
VTNP04004 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
VTNP04004 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
VTNP04004 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.63■□□□□ 0.41
VTNP04004 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
VTNP04004 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VTNP04004 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.62■□□□□ 0.41
VTNP04004 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VTNP04004 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.62■□□□□ 0.41
VTNP04004 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VTNP04004 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VTNP04004 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VTNP04004 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VTNP04004 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
VTNP04004 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.62■□□□□ 0.41
VTNP04004 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.62■□□□□ 0.41
VTNP04004 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VTNP04004 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VTNP04004 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VTNP04004 PCDHA14-201ENST00000506751 2298 ntBASIC17.62■□□□□ 0.41
VTNP04004 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.62■□□□□ 0.41
VTNP04004 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VTNP04004 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
VTNP04004 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.62■□□□□ 0.41
VTNP04004 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.62■□□□□ 0.41
VTNP04004 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VTNP04004 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VTNP04004 GK-202ENST00000378941 458 ntTSL 3 BASIC17.62■□□□□ 0.41
VTNP04004 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.62■□□□□ 0.41
VTNP04004 EEF1DP4-201ENST00000446006 880 ntBASIC17.62■□□□□ 0.41
VTNP04004 KRT17P7-201ENST00000451704 1104 ntBASIC17.62■□□□□ 0.41
VTNP04004 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VTNP04004 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.62■□□□□ 0.41
VTNP04004 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.62■□□□□ 0.41
VTNP04004 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VTNP04004 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.62■□□□□ 0.41
VTNP04004 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms