Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
APOA1P02647 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
APOA1P02647 CD99P1-205ENST00000527459 561 ntBASIC14.51□□□□□ -0.09
APOA1P02647 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.51□□□□□ -0.09
APOA1P02647 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC14.51□□□□□ -0.09
APOA1P02647 AC010947.1-201ENST00000623454 693 ntBASIC14.51□□□□□ -0.09
APOA1P02647 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOA1P02647 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOA1P02647 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.51□□□□□ -0.09
APOA1P02647 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.51□□□□□ -0.09
APOA1P02647 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOA1P02647 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.51□□□□□ -0.09
APOA1P02647 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOA1P02647 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOA1P02647 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOA1P02647 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOA1P02647 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.51□□□□□ -0.09
APOA1P02647 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
APOA1P02647 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC14.51□□□□□ -0.09
APOA1P02647 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
APOA1P02647 AC079781.5-202ENST00000641784 3743 ntBASIC14.51□□□□□ -0.09
APOA1P02647 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
APOA1P02647 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
APOA1P02647 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
APOA1P02647 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOA1P02647 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
APOA1P02647 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
APOA1P02647 CYP2D8P-201ENST00000433633 1490 ntBASIC14.5□□□□□ -0.09
APOA1P02647 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.5□□□□□ -0.09
APOA1P02647 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.5□□□□□ -0.09
APOA1P02647 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
APOA1P02647 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.5□□□□□ -0.09
APOA1P02647 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA1P02647 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.5□□□□□ -0.09
APOA1P02647 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
APOA1P02647 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA1P02647 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA1P02647 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA1P02647 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA1P02647 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA1P02647 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
APOA1P02647 AC005840.4-201ENST00000541242 2494 ntBASIC14.5□□□□□ -0.09
APOA1P02647 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
APOA1P02647 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA1P02647 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA1P02647 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.5□□□□□ -0.09
APOA1P02647 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA1P02647 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA1P02647 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA1P02647 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC14.5□□□□□ -0.09
APOA1P02647 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC14.5□□□□□ -0.09
APOA1P02647 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA1P02647 NAPSB-206ENST00000562112 1266 ntBASIC14.5□□□□□ -0.09
APOA1P02647 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.5□□□□□ -0.09
APOA1P02647 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
APOA1P02647 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.5□□□□□ -0.09
APOA1P02647 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC14.5□□□□□ -0.09
APOA1P02647 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC14.5□□□□□ -0.09
APOA1P02647 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
APOA1P02647 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA1P02647 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
APOA1P02647 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
APOA1P02647 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA1P02647 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA1P02647 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA1P02647 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA1P02647 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA1P02647 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
APOA1P02647 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA1P02647 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA1P02647 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
APOA1P02647 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA1P02647 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA1P02647 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
APOA1P02647 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
APOA1P02647 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
APOA1P02647 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA1P02647 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
APOA1P02647 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
APOA1P02647 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOA1P02647 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.49□□□□□ -0.09
APOA1P02647 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
APOA1P02647 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOA1P02647 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOA1P02647 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOA1P02647 AL031595.1-201ENST00000623969 4709 ntBASIC14.49□□□□□ -0.09
APOA1P02647 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.49□□□□□ -0.09
APOA1P02647 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
APOA1P02647 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.49□□□□□ -0.09
APOA1P02647 AC005252.3-201ENST00000623855 2258 ntBASIC14.49□□□□□ -0.09
APOA1P02647 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.49□□□□□ -0.09
APOA1P02647 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
APOA1P02647 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
APOA1P02647 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.49□□□□□ -0.09
APOA1P02647 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
APOA1P02647 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
APOA1P02647 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
APOA1P02647 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOA1P02647 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOA1P02647 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms