Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.75■□□□□ 0.11
KRT6AP02538 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
KRT6AP02538 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.75■□□□□ 0.11
KRT6AP02538 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KRT6AP02538 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.75■□□□□ 0.11
KRT6AP02538 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.74■□□□□ 0.11
KRT6AP02538 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.74■□□□□ 0.11
KRT6AP02538 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
KRT6AP02538 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
KRT6AP02538 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
KRT6AP02538 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
KRT6AP02538 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.74■□□□□ 0.11
KRT6AP02538 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.74■□□□□ 0.11
KRT6AP02538 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
KRT6AP02538 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
KRT6AP02538 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.74■□□□□ 0.11
KRT6AP02538 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.74■□□□□ 0.11
KRT6AP02538 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
KRT6AP02538 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
KRT6AP02538 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
KRT6AP02538 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.74■□□□□ 0.11
KRT6AP02538 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
KRT6AP02538 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
KRT6AP02538 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.74■□□□□ 0.11
KRT6AP02538 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
KRT6AP02538 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
KRT6AP02538 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
KRT6AP02538 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
KRT6AP02538 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
KRT6AP02538 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
KRT6AP02538 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.74■□□□□ 0.11
KRT6AP02538 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.74■□□□□ 0.11
KRT6AP02538 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
KRT6AP02538 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
KRT6AP02538 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
KRT6AP02538 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.74■□□□□ 0.11
KRT6AP02538 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.74■□□□□ 0.11
KRT6AP02538 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
KRT6AP02538 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.74■□□□□ 0.11
KRT6AP02538 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.74■□□□□ 0.11
KRT6AP02538 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.74■□□□□ 0.11
KRT6AP02538 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
KRT6AP02538 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
KRT6AP02538 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.74■□□□□ 0.11
KRT6AP02538 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.74■□□□□ 0.11
KRT6AP02538 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
KRT6AP02538 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
KRT6AP02538 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
KRT6AP02538 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
KRT6AP02538 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
KRT6AP02538 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
KRT6AP02538 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
KRT6AP02538 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.74■□□□□ 0.11
KRT6AP02538 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
KRT6AP02538 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.74■□□□□ 0.11
KRT6AP02538 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
KRT6AP02538 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
KRT6AP02538 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.74■□□□□ 0.11
KRT6AP02538 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
KRT6AP02538 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
KRT6AP02538 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.73■□□□□ 0.11
KRT6AP02538 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
KRT6AP02538 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KRT6AP02538 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KRT6AP02538 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
KRT6AP02538 AC016027.1-202ENST00000607927 1699 ntBASIC15.73■□□□□ 0.11
KRT6AP02538 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KRT6AP02538 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.73■□□□□ 0.11
KRT6AP02538 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
KRT6AP02538 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.73■□□□□ 0.11
KRT6AP02538 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KRT6AP02538 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
KRT6AP02538 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
KRT6AP02538 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
KRT6AP02538 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
KRT6AP02538 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.73■□□□□ 0.11
KRT6AP02538 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KRT6AP02538 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.73■□□□□ 0.11
KRT6AP02538 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
KRT6AP02538 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
KRT6AP02538 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
KRT6AP02538 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KRT6AP02538 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.73■□□□□ 0.11
KRT6AP02538 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KRT6AP02538 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
KRT6AP02538 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
KRT6AP02538 HAUS4P1-201ENST00000406739 1145 ntBASIC15.73■□□□□ 0.11
KRT6AP02538 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.73■□□□□ 0.11
KRT6AP02538 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.73■□□□□ 0.11
KRT6AP02538 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.73■□□□□ 0.11
KRT6AP02538 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.73■□□□□ 0.11
KRT6AP02538 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.73■□□□□ 0.11
KRT6AP02538 KRT19P2-202ENST00000557173 1012 ntBASIC15.73■□□□□ 0.11
KRT6AP02538 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.73■□□□□ 0.11
KRT6AP02538 AC034105.1-201ENST00000563488 319 ntBASIC15.73■□□□□ 0.11
KRT6AP02538 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.73■□□□□ 0.11
KRT6AP02538 AL161645.1-201ENST00000622716 1255 ntBASIC15.73■□□□□ 0.11
KRT6AP02538 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.73■□□□□ 0.11
KRT6AP02538 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
KRT6AP02538 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms