Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.94■□□□□ 0.3
TRUB2O95900 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
TRUB2O95900 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRUB2O95900 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRUB2O95900 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRUB2O95900 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRUB2O95900 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRUB2O95900 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRUB2O95900 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.94■□□□□ 0.3
TRUB2O95900 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
TRUB2O95900 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRUB2O95900 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.93■□□□□ 0.3
TRUB2O95900 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRUB2O95900 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TRUB2O95900 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRUB2O95900 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.93■□□□□ 0.3
TRUB2O95900 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRUB2O95900 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRUB2O95900 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRUB2O95900 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRUB2O95900 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.93■□□□□ 0.3
TRUB2O95900 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRUB2O95900 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
TRUB2O95900 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
TRUB2O95900 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.93■□□□□ 0.3
TRUB2O95900 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.93■□□□□ 0.3
TRUB2O95900 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
TRUB2O95900 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.93■□□□□ 0.3
TRUB2O95900 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.93■□□□□ 0.3
TRUB2O95900 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRUB2O95900 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TRUB2O95900 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRUB2O95900 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRUB2O95900 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRUB2O95900 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRUB2O95900 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
TRUB2O95900 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRUB2O95900 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRUB2O95900 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.93■□□□□ 0.3
TRUB2O95900 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRUB2O95900 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.93■□□□□ 0.3
TRUB2O95900 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.92■□□□□ 0.3
TRUB2O95900 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.92■□□□□ 0.3
TRUB2O95900 PAUPAR-201ENST00000630360 2965 ntBASIC16.92■□□□□ 0.3
TRUB2O95900 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRUB2O95900 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRUB2O95900 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRUB2O95900 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.92■□□□□ 0.3
TRUB2O95900 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRUB2O95900 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TRUB2O95900 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.92■□□□□ 0.3
TRUB2O95900 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TRUB2O95900 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRUB2O95900 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TRUB2O95900 PMS2P2-201ENST00000425039 1128 ntBASIC16.92■□□□□ 0.3
TRUB2O95900 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.92■□□□□ 0.3
TRUB2O95900 AC245100.5-201ENST00000452108 331 ntBASIC16.92■□□□□ 0.3
TRUB2O95900 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRUB2O95900 AC003101.2-201ENST00000612557 442 ntBASIC16.92■□□□□ 0.3
TRUB2O95900 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.92■□□□□ 0.3
TRUB2O95900 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRUB2O95900 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRUB2O95900 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRUB2O95900 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TRUB2O95900 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.92■□□□□ 0.3
TRUB2O95900 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRUB2O95900 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.92■□□□□ 0.3
TRUB2O95900 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRUB2O95900 AC132872.4-202ENST00000622924 2756 ntBASIC16.92■□□□□ 0.3
TRUB2O95900 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRUB2O95900 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.92■□□□□ 0.3
TRUB2O95900 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRUB2O95900 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.92■□□□□ 0.3
TRUB2O95900 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.92■□□□□ 0.3
TRUB2O95900 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRUB2O95900 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.92■□□□□ 0.3
TRUB2O95900 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRUB2O95900 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TRUB2O95900 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRUB2O95900 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRUB2O95900 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRUB2O95900 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRUB2O95900 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.91■□□□□ 0.3
TRUB2O95900 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRUB2O95900 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRUB2O95900 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.91■□□□□ 0.3
TRUB2O95900 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.91■□□□□ 0.3
TRUB2O95900 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRUB2O95900 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRUB2O95900 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRUB2O95900 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRUB2O95900 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRUB2O95900 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.91■□□□□ 0.3
TRUB2O95900 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRUB2O95900 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.91■□□□□ 0.3
TRUB2O95900 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.91■□□□□ 0.3
TRUB2O95900 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.91■□□□□ 0.3
TRUB2O95900 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.91■□□□□ 0.3
TRUB2O95900 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.91■□□□□ 0.3
TRUB2O95900 MIR4453-201ENST00000584019 89 ntBASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms