Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 PMS2P7-201ENST00000506558 1336 ntBASIC16.3■□□□□ 0.2
VAPBO95292 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VAPBO95292 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VAPBO95292 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
VAPBO95292 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VAPBO95292 AL365330.1-201ENST00000607459 531 ntBASIC16.3■□□□□ 0.2
VAPBO95292 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.3■□□□□ 0.2
VAPBO95292 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VAPBO95292 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VAPBO95292 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
VAPBO95292 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VAPBO95292 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
VAPBO95292 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
VAPBO95292 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VAPBO95292 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
VAPBO95292 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
VAPBO95292 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VAPBO95292 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.3■□□□□ 0.2
VAPBO95292 AC068418.2-201ENST00000577309 3703 ntBASIC16.3■□□□□ 0.2
VAPBO95292 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VAPBO95292 AC008677.1-201ENST00000519230 1561 ntBASIC16.3■□□□□ 0.2
VAPBO95292 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VAPBO95292 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.3■□□□□ 0.2
VAPBO95292 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VAPBO95292 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.29■□□□□ 0.2
VAPBO95292 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VAPBO95292 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VAPBO95292 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VAPBO95292 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
VAPBO95292 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VAPBO95292 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
VAPBO95292 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.29■□□□□ 0.2
VAPBO95292 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
VAPBO95292 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VAPBO95292 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VAPBO95292 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VAPBO95292 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VAPBO95292 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.29■□□□□ 0.2
VAPBO95292 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VAPBO95292 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.29■□□□□ 0.2
VAPBO95292 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VAPBO95292 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VAPBO95292 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
VAPBO95292 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.29■□□□□ 0.2
VAPBO95292 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.29■□□□□ 0.2
VAPBO95292 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VAPBO95292 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.29■□□□□ 0.2
VAPBO95292 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.29■□□□□ 0.2
VAPBO95292 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.29■□□□□ 0.2
VAPBO95292 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VAPBO95292 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VAPBO95292 RARRES2P8-201ENST00000566335 367 ntBASIC16.29■□□□□ 0.2
VAPBO95292 AL138918.1-201ENST00000568306 659 ntBASIC16.29■□□□□ 0.2
VAPBO95292 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.29■□□□□ 0.2
VAPBO95292 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.29■□□□□ 0.2
VAPBO95292 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VAPBO95292 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
VAPBO95292 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
VAPBO95292 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
VAPBO95292 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VAPBO95292 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VAPBO95292 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.29■□□□□ 0.2
VAPBO95292 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VAPBO95292 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VAPBO95292 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VAPBO95292 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.29■□□□□ 0.2
VAPBO95292 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.29■□□□□ 0.2
VAPBO95292 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VAPBO95292 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VAPBO95292 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VAPBO95292 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
VAPBO95292 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
VAPBO95292 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
VAPBO95292 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.28■□□□□ 0.2
VAPBO95292 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.28■□□□□ 0.2
VAPBO95292 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VAPBO95292 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VAPBO95292 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VAPBO95292 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VAPBO95292 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.28■□□□□ 0.2
VAPBO95292 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.28■□□□□ 0.2
VAPBO95292 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
VAPBO95292 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VAPBO95292 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VAPBO95292 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VAPBO95292 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VAPBO95292 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VAPBO95292 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VAPBO95292 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VAPBO95292 HAUS4P1-201ENST00000406739 1145 ntBASIC16.28■□□□□ 0.2
VAPBO95292 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.28■□□□□ 0.2
VAPBO95292 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.28■□□□□ 0.2
VAPBO95292 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VAPBO95292 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.28■□□□□ 0.2
VAPBO95292 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.28■□□□□ 0.2
VAPBO95292 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VAPBO95292 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VAPBO95292 AC091812.2-201ENST00000619081 385 ntBASIC16.28■□□□□ 0.2
VAPBO95292 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VAPBO95292 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms