Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 TSPY17P-201ENST00000450329 467 ntBASIC14.08□□□□□ -0.16
CCNKO75909 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.08□□□□□ -0.16
CCNKO75909 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCNKO75909 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.08□□□□□ -0.16
CCNKO75909 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC14.08□□□□□ -0.16
CCNKO75909 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.08□□□□□ -0.16
CCNKO75909 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCNKO75909 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC14.08□□□□□ -0.16
CCNKO75909 AP005242.2-201ENST00000580065 1175 ntBASIC14.08□□□□□ -0.16
CCNKO75909 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC14.08□□□□□ -0.16
CCNKO75909 GRAMD4P8-201ENST00000605465 1115 ntBASIC14.08□□□□□ -0.16
CCNKO75909 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC14.08□□□□□ -0.16
CCNKO75909 AC024243.1-201ENST00000609234 778 ntBASIC14.08□□□□□ -0.16
CCNKO75909 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC14.08□□□□□ -0.16
CCNKO75909 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CCNKO75909 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCNKO75909 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCNKO75909 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCNKO75909 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCNKO75909 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CCNKO75909 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCNKO75909 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCNKO75909 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCNKO75909 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCNKO75909 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.08□□□□□ -0.16
CCNKO75909 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCNKO75909 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCNKO75909 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CCNKO75909 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.08□□□□□ -0.16
CCNKO75909 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.08□□□□□ -0.16
CCNKO75909 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.08□□□□□ -0.16
CCNKO75909 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCNKO75909 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.08□□□□□ -0.16
CCNKO75909 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.08□□□□□ -0.16
CCNKO75909 AC136759.1-202ENST00000530858 2194 ntBASIC14.07□□□□□ -0.16
CCNKO75909 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCNKO75909 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CCNKO75909 AC092338.2-201ENST00000568827 1415 ntBASIC14.07□□□□□ -0.16
CCNKO75909 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.07□□□□□ -0.16
CCNKO75909 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.07□□□□□ -0.16
CCNKO75909 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CCNKO75909 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCNKO75909 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCNKO75909 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCNKO75909 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCNKO75909 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCNKO75909 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CCNKO75909 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CCNKO75909 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCNKO75909 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCNKO75909 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.07□□□□□ -0.16
CCNKO75909 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCNKO75909 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCNKO75909 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCNKO75909 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCNKO75909 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCNKO75909 MIR648-201ENST00000385046 94 ntBASIC14.07□□□□□ -0.16
CCNKO75909 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCNKO75909 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCNKO75909 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC14.07□□□□□ -0.16
CCNKO75909 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
CCNKO75909 AC113410.3-201ENST00000623366 203 ntBASIC14.07□□□□□ -0.16
CCNKO75909 DECR2-212ENST00000627716 352 ntTSL 2 BASIC14.07□□□□□ -0.16
CCNKO75909 AL928921.2-201ENST00000641325 2442 ntBASIC14.07□□□□□ -0.16
CCNKO75909 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCNKO75909 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCNKO75909 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.07□□□□□ -0.16
CCNKO75909 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCNKO75909 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCNKO75909 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CCNKO75909 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
CCNKO75909 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCNKO75909 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCNKO75909 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCNKO75909 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.07□□□□□ -0.16
CCNKO75909 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCNKO75909 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCNKO75909 AC140479.7-201ENST00000636301 2332 ntBASIC14.07□□□□□ -0.16
CCNKO75909 AL139385.1-201ENST00000611744 3272 ntBASIC14.07□□□□□ -0.16
CCNKO75909 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCNKO75909 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC14.07□□□□□ -0.16
CCNKO75909 AL135905.2-201ENST00000584934 1404 ntBASIC14.07□□□□□ -0.16
CCNKO75909 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCNKO75909 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCNKO75909 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCNKO75909 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.06□□□□□ -0.16
CCNKO75909 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.06□□□□□ -0.16
CCNKO75909 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.06□□□□□ -0.16
CCNKO75909 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCNKO75909 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CCNKO75909 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCNKO75909 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CCNKO75909 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCNKO75909 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCNKO75909 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
CCNKO75909 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.06□□□□□ -0.16
CCNKO75909 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCNKO75909 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCNKO75909 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCNKO75909 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms