Protein–RNA interactions for Protein: O43678

NDUFA2, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA2O43678 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NDUFA2O43678 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13.99□□□□□ -0.17
NDUFA2O43678 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFA2O43678 KRT8P39-201ENST00000396270 1433 ntBASIC13.98□□□□□ -0.17
NDUFA2O43678 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
NDUFA2O43678 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFA2O43678 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFA2O43678 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFA2O43678 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.98□□□□□ -0.17
NDUFA2O43678 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFA2O43678 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFA2O43678 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFA2O43678 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFA2O43678 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFA2O43678 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.98□□□□□ -0.17
NDUFA2O43678 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFA2O43678 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.98□□□□□ -0.17
NDUFA2O43678 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFA2O43678 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
NDUFA2O43678 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFA2O43678 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFA2O43678 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFA2O43678 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFA2O43678 HLA-J-202ENST00000469281 1241 ntBASIC13.98□□□□□ -0.17
NDUFA2O43678 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
NDUFA2O43678 FAM86C2P-203ENST00000528684 1004 ntBASIC13.98□□□□□ -0.17
NDUFA2O43678 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.98□□□□□ -0.17
NDUFA2O43678 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.98□□□□□ -0.17
NDUFA2O43678 AC005829.1-201ENST00000570002 483 ntBASIC13.98□□□□□ -0.17
NDUFA2O43678 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.98□□□□□ -0.17
NDUFA2O43678 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.98□□□□□ -0.17
NDUFA2O43678 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.98□□□□□ -0.17
NDUFA2O43678 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.98□□□□□ -0.17
NDUFA2O43678 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.98□□□□□ -0.17
NDUFA2O43678 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFA2O43678 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
NDUFA2O43678 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFA2O43678 AC139749.1-202ENST00000617529 3139 ntBASIC13.98□□□□□ -0.17
NDUFA2O43678 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFA2O43678 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
NDUFA2O43678 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.98□□□□□ -0.17
NDUFA2O43678 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
NDUFA2O43678 AC022532.1-201ENST00000624563 1728 ntBASIC13.98□□□□□ -0.17
NDUFA2O43678 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFA2O43678 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NDUFA2O43678 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA2O43678 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA2O43678 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA2O43678 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.97□□□□□ -0.17
NDUFA2O43678 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.97□□□□□ -0.17
NDUFA2O43678 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA2O43678 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA2O43678 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
NDUFA2O43678 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.97□□□□□ -0.17
NDUFA2O43678 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.97□□□□□ -0.17
NDUFA2O43678 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA2O43678 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.97□□□□□ -0.17
NDUFA2O43678 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA2O43678 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA2O43678 AC007191.1-201ENST00000623179 2995 ntBASIC13.97□□□□□ -0.17
NDUFA2O43678 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
NDUFA2O43678 SLC9A3P3-201ENST00000457608 2229 ntBASIC13.97□□□□□ -0.17
NDUFA2O43678 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA2O43678 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA2O43678 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA2O43678 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
NDUFA2O43678 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA2O43678 RNU1-129P-201ENST00000384064 167 ntBASIC13.97□□□□□ -0.17
NDUFA2O43678 KRT18P13-201ENST00000400056 1290 ntBASIC13.97□□□□□ -0.17
NDUFA2O43678 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.97□□□□□ -0.17
NDUFA2O43678 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.97□□□□□ -0.17
NDUFA2O43678 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA2O43678 U1.21-201ENST00000580816 167 ntBASIC13.97□□□□□ -0.17
NDUFA2O43678 AL009183.1-201ENST00000603760 355 ntBASIC13.97□□□□□ -0.17
NDUFA2O43678 AL031055.1-201ENST00000606362 631 ntBASIC13.97□□□□□ -0.17
NDUFA2O43678 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA2O43678 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA2O43678 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA2O43678 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA2O43678 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA2O43678 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA2O43678 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA2O43678 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA2O43678 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
NDUFA2O43678 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC13.97□□□□□ -0.17
NDUFA2O43678 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.97□□□□□ -0.17
NDUFA2O43678 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
NDUFA2O43678 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA2O43678 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
NDUFA2O43678 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
NDUFA2O43678 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NDUFA2O43678 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
NDUFA2O43678 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFA2O43678 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
NDUFA2O43678 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFA2O43678 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFA2O43678 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFA2O43678 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFA2O43678 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NDUFA2O43678 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms