Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.18■□□□□ 0.5
DDX39AO00148 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.18■□□□□ 0.5
DDX39AO00148 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.18■□□□□ 0.5
DDX39AO00148 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.18■□□□□ 0.5
DDX39AO00148 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX39AO00148 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.18■□□□□ 0.5
DDX39AO00148 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX39AO00148 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX39AO00148 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX39AO00148 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX39AO00148 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DDX39AO00148 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.18■□□□□ 0.5
DDX39AO00148 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DDX39AO00148 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.17■□□□□ 0.5
DDX39AO00148 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DDX39AO00148 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DDX39AO00148 AC022144.1-201ENST00000602255 1580 ntBASIC18.17■□□□□ 0.5
DDX39AO00148 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DDX39AO00148 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
DDX39AO00148 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.17■□□□□ 0.5
DDX39AO00148 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.17■□□□□ 0.5
DDX39AO00148 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DDX39AO00148 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DDX39AO00148 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
DDX39AO00148 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DDX39AO00148 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DDX39AO00148 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DDX39AO00148 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DDX39AO00148 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
DDX39AO00148 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DDX39AO00148 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DDX39AO00148 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
DDX39AO00148 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DDX39AO00148 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DDX39AO00148 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DDX39AO00148 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DDX39AO00148 AC002472.2-201ENST00000442739 958 ntBASIC18.17■□□□□ 0.5
DDX39AO00148 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.17■□□□□ 0.5
DDX39AO00148 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.17■□□□□ 0.5
DDX39AO00148 AL512361.1-201ENST00000554200 418 ntBASIC18.17■□□□□ 0.5
DDX39AO00148 RN7SL204P-201ENST00000582831 262 ntBASIC18.17■□□□□ 0.5
DDX39AO00148 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.17■□□□□ 0.5
DDX39AO00148 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
DDX39AO00148 AC006449.6-201ENST00000612330 2296 ntBASIC18.17■□□□□ 0.5
DDX39AO00148 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DDX39AO00148 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DDX39AO00148 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
DDX39AO00148 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.17■□□□□ 0.5
DDX39AO00148 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
DDX39AO00148 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DDX39AO00148 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
DDX39AO00148 CYP4F24P-201ENST00000586049 1580 ntBASIC18.17■□□□□ 0.5
DDX39AO00148 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DDX39AO00148 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.16■□□□□ 0.5
DDX39AO00148 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
DDX39AO00148 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX39AO00148 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX39AO00148 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DDX39AO00148 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX39AO00148 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX39AO00148 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.16■□□□□ 0.5
DDX39AO00148 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.16■□□□□ 0.5
DDX39AO00148 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.5
DDX39AO00148 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX39AO00148 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.16■□□□□ 0.5
DDX39AO00148 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.16■□□□□ 0.5
DDX39AO00148 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.16■□□□□ 0.5
DDX39AO00148 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.16■□□□□ 0.5
DDX39AO00148 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.16■□□□□ 0.5
DDX39AO00148 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.16■□□□□ 0.5
DDX39AO00148 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.16■□□□□ 0.5
DDX39AO00148 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.16■□□□□ 0.5
DDX39AO00148 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.16■□□□□ 0.5
DDX39AO00148 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.16■□□□□ 0.5
DDX39AO00148 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.16■□□□□ 0.5
DDX39AO00148 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX39AO00148 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.16■□□□□ 0.5
DDX39AO00148 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX39AO00148 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX39AO00148 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.16■□□□□ 0.5
DDX39AO00148 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
DDX39AO00148 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX39AO00148 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX39AO00148 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.15■□□□□ 0.5
DDX39AO00148 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX39AO00148 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX39AO00148 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DDX39AO00148 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX39AO00148 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
DDX39AO00148 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
DDX39AO00148 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX39AO00148 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
DDX39AO00148 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX39AO00148 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX39AO00148 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
DDX39AO00148 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.15■□□□□ 0.5
DDX39AO00148 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
DDX39AO00148 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
DDX39AO00148 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX39AO00148 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms