Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.48■□□□□ 0.55
TMEM88BA6NKF7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
TMEM88BA6NKF7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
TMEM88BA6NKF7 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM88BA6NKF7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM88BA6NKF7 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM88BA6NKF7 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM88BA6NKF7 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TMEM88BA6NKF7 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.47■□□□□ 0.55
TMEM88BA6NKF7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
TMEM88BA6NKF7 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TMEM88BA6NKF7 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM88BA6NKF7 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM88BA6NKF7 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
TMEM88BA6NKF7 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM88BA6NKF7 TISP43-201ENST00000409793 538 ntTSL 4 BASIC18.47■□□□□ 0.55
TMEM88BA6NKF7 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM88BA6NKF7 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC18.47■□□□□ 0.55
TMEM88BA6NKF7 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC18.47■□□□□ 0.55
TMEM88BA6NKF7 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC18.47■□□□□ 0.55
TMEM88BA6NKF7 AC022217.1-201ENST00000521069 738 ntBASIC18.47■□□□□ 0.55
TMEM88BA6NKF7 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM88BA6NKF7 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC18.47■□□□□ 0.55
TMEM88BA6NKF7 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.47■□□□□ 0.55
TMEM88BA6NKF7 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TMEM88BA6NKF7 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC18.47■□□□□ 0.55
TMEM88BA6NKF7 ECM1P1-201ENST00000604092 1279 ntBASIC18.47■□□□□ 0.55
TMEM88BA6NKF7 AL645939.5-201ENST00000606834 243 ntBASIC18.47■□□□□ 0.55
TMEM88BA6NKF7 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC18.47■□□□□ 0.55
TMEM88BA6NKF7 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC18.47■□□□□ 0.55
TMEM88BA6NKF7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM88BA6NKF7 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC18.47■□□□□ 0.55
TMEM88BA6NKF7 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM88BA6NKF7 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM88BA6NKF7 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM88BA6NKF7 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC18.47■□□□□ 0.55
TMEM88BA6NKF7 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM88BA6NKF7 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TMEM88BA6NKF7 AC092053.1-201ENST00000605787 1936 ntBASIC18.47■□□□□ 0.55
TMEM88BA6NKF7 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM88BA6NKF7 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM88BA6NKF7 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TMEM88BA6NKF7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.46■□□□□ 0.55
TMEM88BA6NKF7 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TMEM88BA6NKF7 RNF165-205ENST00000588679 2904 ntBASIC18.46■□□□□ 0.55
TMEM88BA6NKF7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TMEM88BA6NKF7 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TMEM88BA6NKF7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TMEM88BA6NKF7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TMEM88BA6NKF7 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.46■□□□□ 0.55
TMEM88BA6NKF7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TMEM88BA6NKF7 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
TMEM88BA6NKF7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.46■□□□□ 0.55
TMEM88BA6NKF7 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TMEM88BA6NKF7 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TMEM88BA6NKF7 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC18.46■□□□□ 0.55
TMEM88BA6NKF7 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TMEM88BA6NKF7 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC18.46■□□□□ 0.55
TMEM88BA6NKF7 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TMEM88BA6NKF7 AC012618.1-201ENST00000461223 412 ntBASIC18.46■□□□□ 0.55
TMEM88BA6NKF7 KRT18P43-201ENST00000469825 1281 ntBASIC18.46■□□□□ 0.55
TMEM88BA6NKF7 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC18.46■□□□□ 0.55
TMEM88BA6NKF7 PTK2-225ENST00000520892 571 ntTSL 4 BASIC18.46■□□□□ 0.55
TMEM88BA6NKF7 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC18.46■□□□□ 0.55
TMEM88BA6NKF7 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC18.46■□□□□ 0.55
TMEM88BA6NKF7 NPM1P43-201ENST00000558669 786 ntBASIC18.46■□□□□ 0.55
TMEM88BA6NKF7 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TMEM88BA6NKF7 MIR6756-201ENST00000616240 63 ntBASIC18.46■□□□□ 0.55
TMEM88BA6NKF7 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TMEM88BA6NKF7 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TMEM88BA6NKF7 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.46■□□□□ 0.55
TMEM88BA6NKF7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TMEM88BA6NKF7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TMEM88BA6NKF7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.46■□□□□ 0.54
TMEM88BA6NKF7 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM88BA6NKF7 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.45■□□□□ 0.54
TMEM88BA6NKF7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM88BA6NKF7 AC087289.5-201ENST00000586076 3175 ntBASIC18.45■□□□□ 0.54
TMEM88BA6NKF7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM88BA6NKF7 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM88BA6NKF7 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM88BA6NKF7 AL121723.1-201ENST00000445194 1519 ntBASIC18.45■□□□□ 0.54
TMEM88BA6NKF7 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM88BA6NKF7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM88BA6NKF7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM88BA6NKF7 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM88BA6NKF7 AP002490.2-201ENST00000524791 560 ntBASIC18.45■□□□□ 0.54
TMEM88BA6NKF7 CFL1-206ENST00000527344 962 ntTSL 2 BASIC18.45■□□□□ 0.54
TMEM88BA6NKF7 AC135983.4-201ENST00000564116 1262 ntBASIC18.45■□□□□ 0.54
TMEM88BA6NKF7 AL138688.1-201ENST00000624851 1594 ntBASIC18.45■□□□□ 0.54
TMEM88BA6NKF7 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
TMEM88BA6NKF7 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC18.45■□□□□ 0.54
TMEM88BA6NKF7 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM88BA6NKF7 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM88BA6NKF7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TMEM88BA6NKF7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TMEM88BA6NKF7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TMEM88BA6NKF7 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TMEM88BA6NKF7 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TMEM88BA6NKF7 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms