Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 FO393414.2-201ENST00000405153 598 ntBASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 TPRX2P-201ENST00000535362 881 ntBASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 AC138969.3-201ENST00000546612 1459 ntBASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 AC138932.2-201ENST00000548268 1459 ntBASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 AC126755.4-201ENST00000549796 1459 ntBASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TBC1D3FA6NER0 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TBC1D3FA6NER0 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TBC1D3FA6NER0 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TBC1D3FA6NER0 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.06■□□□□ 0.16
TBC1D3FA6NER0 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TBC1D3FA6NER0 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TBC1D3FA6NER0 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TBC1D3FA6NER0 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TBC1D3FA6NER0 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TBC1D3FA6NER0 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TBC1D3FA6NER0 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.06■□□□□ 0.16
TBC1D3FA6NER0 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TBC1D3FA6NER0 AL592424.1-201ENST00000563624 1536 ntBASIC16.06■□□□□ 0.16
TBC1D3FA6NER0 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TBC1D3FA6NER0 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.06■□□□□ 0.16
TBC1D3FA6NER0 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.06■□□□□ 0.16
TBC1D3FA6NER0 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TBC1D3FA6NER0 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TBC1D3FA6NER0 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TBC1D3FA6NER0 DGCR5-201ENST00000399539 862 ntBASIC16.06■□□□□ 0.16
TBC1D3FA6NER0 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.06■□□□□ 0.16
TBC1D3FA6NER0 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.06■□□□□ 0.16
TBC1D3FA6NER0 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.06■□□□□ 0.16
TBC1D3FA6NER0 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.06■□□□□ 0.16
TBC1D3FA6NER0 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.06■□□□□ 0.16
TBC1D3FA6NER0 TIMM17BP1-201ENST00000545713 516 ntBASIC16.06■□□□□ 0.16
TBC1D3FA6NER0 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.06■□□□□ 0.16
TBC1D3FA6NER0 CHCHD2P3-201ENST00000603038 451 ntBASIC16.06■□□□□ 0.16
TBC1D3FA6NER0 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TBC1D3FA6NER0 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TBC1D3FA6NER0 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TBC1D3FA6NER0 AC092171.3-201ENST00000610122 2651 ntBASIC16.06■□□□□ 0.16
TBC1D3FA6NER0 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TBC1D3FA6NER0 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TBC1D3FA6NER0 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TBC1D3FA6NER0 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.06■□□□□ 0.16
TBC1D3FA6NER0 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TBC1D3FA6NER0 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TBC1D3FA6NER0 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.06■□□□□ 0.16
TBC1D3FA6NER0 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.06■□□□□ 0.16
TBC1D3FA6NER0 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TBC1D3FA6NER0 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 AC005052.1-201ENST00000625181 2492 ntBASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 AC079328.2-201ENST00000561241 3354 ntBASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TBC1D3FA6NER0 AC098614.1-201ENST00000368528 745 ntBASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms