Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 AL603756.1-201ENST00000606511 2163 ntBASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 AC009053.2-201ENST00000563701 2365 ntBASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 KRT8P22-201ENST00000562317 1415 ntBASIC15.26■□□□□ 0.03
CCDC187A0A096LP49 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 AC018665.1-201ENST00000622927 1362 ntBASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 MIR4525-201ENST00000580000 75 ntBASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 AC133539.2-201ENST00000604757 467 ntBASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 REXO1L6P-201ENST00000603433 1515 ntBASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC187A0A096LP49 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC187A0A096LP49 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CCDC187A0A096LP49 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CCDC187A0A096LP49 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC187A0A096LP49 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC187A0A096LP49 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC187A0A096LP49 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC187A0A096LP49 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
CCDC187A0A096LP49 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC187A0A096LP49 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC187A0A096LP49 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC187A0A096LP49 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC187A0A096LP49 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC187A0A096LP49 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC187A0A096LP49 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC187A0A096LP49 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC187A0A096LP49 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC187A0A096LP49 AC004987.2-201ENST00000395959 1148 ntBASIC15.24■□□□□ 0.03
CCDC187A0A096LP49 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC187A0A096LP49 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC187A0A096LP49 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CCDC187A0A096LP49 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC187A0A096LP49 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.24■□□□□ 0.03
CCDC187A0A096LP49 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC187A0A096LP49 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.24■□□□□ 0.03
CCDC187A0A096LP49 LINC01115-203ENST00000606068 577 ntBASIC15.24■□□□□ 0.03
CCDC187A0A096LP49 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC187A0A096LP49 CU634019.7-201ENST00000624153 1185 ntBASIC15.24■□□□□ 0.03
CCDC187A0A096LP49 FP236241.2-201ENST00000624906 1185 ntBASIC15.24■□□□□ 0.03
CCDC187A0A096LP49 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms