Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 AL596087.1-201ENST00000400979 1969 ntBASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 AC124947.2-201ENST00000547118 1133 ntBASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 AC008735.5-201ENST00000623544 497 ntBASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 FAM215A-202ENST00000632077 792 ntBASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 PGM5P2-202ENST00000637225 1043 ntBASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.65■□□□□ 0.58
R3HCC1Q9Y3T6 R3HDM2P2-201ENST00000401880 2116 ntBASIC18.65■□□□□ 0.58
R3HCC1Q9Y3T6 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3HCC1Q9Y3T6 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
R3HCC1Q9Y3T6 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3HCC1Q9Y3T6 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
R3HCC1Q9Y3T6 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.65■□□□□ 0.58
R3HCC1Q9Y3T6 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
R3HCC1Q9Y3T6 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
R3HCC1Q9Y3T6 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
R3HCC1Q9Y3T6 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3HCC1Q9Y3T6 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
R3HCC1Q9Y3T6 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.65■□□□□ 0.58
R3HCC1Q9Y3T6 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
R3HCC1Q9Y3T6 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
R3HCC1Q9Y3T6 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.65■□□□□ 0.58
R3HCC1Q9Y3T6 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.65■□□□□ 0.58
R3HCC1Q9Y3T6 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.65■□□□□ 0.58
R3HCC1Q9Y3T6 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
R3HCC1Q9Y3T6 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.65■□□□□ 0.58
R3HCC1Q9Y3T6 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.65■□□□□ 0.58
R3HCC1Q9Y3T6 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.65■□□□□ 0.58
R3HCC1Q9Y3T6 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.65■□□□□ 0.58
R3HCC1Q9Y3T6 AC005593.1-201ENST00000624894 515 ntBASIC18.65■□□□□ 0.58
R3HCC1Q9Y3T6 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3HCC1Q9Y3T6 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3HCC1Q9Y3T6 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
R3HCC1Q9Y3T6 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3HCC1Q9Y3T6 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3HCC1Q9Y3T6 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
R3HCC1Q9Y3T6 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
R3HCC1Q9Y3T6 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC18.65■□□□□ 0.58
R3HCC1Q9Y3T6 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3HCC1Q9Y3T6 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3HCC1Q9Y3T6 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3HCC1Q9Y3T6 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
R3HCC1Q9Y3T6 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
R3HCC1Q9Y3T6 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC18.64■□□□□ 0.58
R3HCC1Q9Y3T6 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.64■□□□□ 0.58
R3HCC1Q9Y3T6 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC18.64■□□□□ 0.58
R3HCC1Q9Y3T6 ME2P1-201ENST00000426028 1970 ntBASIC18.64■□□□□ 0.58
R3HCC1Q9Y3T6 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
R3HCC1Q9Y3T6 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
R3HCC1Q9Y3T6 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
R3HCC1Q9Y3T6 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
R3HCC1Q9Y3T6 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
R3HCC1Q9Y3T6 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.64■□□□□ 0.57
R3HCC1Q9Y3T6 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.64■□□□□ 0.57
R3HCC1Q9Y3T6 HNRNPDP1-201ENST00000439535 754 ntBASIC18.64■□□□□ 0.57
R3HCC1Q9Y3T6 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.64■□□□□ 0.57
R3HCC1Q9Y3T6 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms