Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 SNX33P1-201ENST00000592116 1762 ntBASIC17.43■□□□□ 0.38
SSX2IPQ9Y2D8 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
SSX2IPQ9Y2D8 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SSX2IPQ9Y2D8 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SSX2IPQ9Y2D8 AL162727.3-201ENST00000635661 2787 ntBASIC17.43■□□□□ 0.38
SSX2IPQ9Y2D8 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SSX2IPQ9Y2D8 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSX2IPQ9Y2D8 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.43■□□□□ 0.38
SSX2IPQ9Y2D8 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSX2IPQ9Y2D8 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSX2IPQ9Y2D8 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SSX2IPQ9Y2D8 SERBP1P3-201ENST00000459980 809 ntBASIC17.43■□□□□ 0.38
SSX2IPQ9Y2D8 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.43■□□□□ 0.38
SSX2IPQ9Y2D8 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SSX2IPQ9Y2D8 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.43■□□□□ 0.38
SSX2IPQ9Y2D8 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.43■□□□□ 0.38
SSX2IPQ9Y2D8 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SSX2IPQ9Y2D8 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSX2IPQ9Y2D8 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSX2IPQ9Y2D8 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SSX2IPQ9Y2D8 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.43■□□□□ 0.38
SSX2IPQ9Y2D8 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSX2IPQ9Y2D8 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SSX2IPQ9Y2D8 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.43■□□□□ 0.38
SSX2IPQ9Y2D8 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.43■□□□□ 0.38
SSX2IPQ9Y2D8 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSX2IPQ9Y2D8 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSX2IPQ9Y2D8 AC092053.1-201ENST00000605787 1936 ntBASIC17.43■□□□□ 0.38
SSX2IPQ9Y2D8 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 AL391825.1-201ENST00000457671 1364 ntBASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 AC093724.1-201ENST00000448659 1027 ntBASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 KRT17P7-201ENST00000451704 1104 ntBASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 RN7SL618P-201ENST00000477850 296 ntBASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 BANF1P1-201ENST00000553684 263 ntBASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 TP53TG3HP-202ENST00000569755 579 ntBASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 AC008738.7-201ENST00000609744 511 ntBASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSX2IPQ9Y2D8 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SSX2IPQ9Y2D8 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSX2IPQ9Y2D8 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSX2IPQ9Y2D8 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SSX2IPQ9Y2D8 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.41■□□□□ 0.38
SSX2IPQ9Y2D8 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSX2IPQ9Y2D8 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSX2IPQ9Y2D8 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SSX2IPQ9Y2D8 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SSX2IPQ9Y2D8 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SSX2IPQ9Y2D8 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.41■□□□□ 0.38
SSX2IPQ9Y2D8 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.41■□□□□ 0.38
SSX2IPQ9Y2D8 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSX2IPQ9Y2D8 AC087499.6-201ENST00000411576 835 ntBASIC17.41■□□□□ 0.38
SSX2IPQ9Y2D8 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SSX2IPQ9Y2D8 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.41■□□□□ 0.38
SSX2IPQ9Y2D8 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.41■□□□□ 0.38
SSX2IPQ9Y2D8 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.41■□□□□ 0.38
SSX2IPQ9Y2D8 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.41■□□□□ 0.38
SSX2IPQ9Y2D8 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
SSX2IPQ9Y2D8 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSX2IPQ9Y2D8 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SSX2IPQ9Y2D8 AC007541.1-201ENST00000570282 1469 ntBASIC17.41■□□□□ 0.38
SSX2IPQ9Y2D8 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.41■□□□□ 0.38
SSX2IPQ9Y2D8 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSX2IPQ9Y2D8 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSX2IPQ9Y2D8 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSX2IPQ9Y2D8 AL391256.1-201ENST00000443260 1855 ntBASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms