Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC20.42■□□□□ 0.86
SCN11AQ9UI33 AC009542.2-202ENST00000619004 1067 ntBASIC20.42■□□□□ 0.86
SCN11AQ9UI33 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC20.42■□□□□ 0.86
SCN11AQ9UI33 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC20.42■□□□□ 0.86
SCN11AQ9UI33 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCN11AQ9UI33 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
SCN11AQ9UI33 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCN11AQ9UI33 TUBB1P2-201ENST00000422712 1306 ntBASIC20.42■□□□□ 0.86
SCN11AQ9UI33 TUBB1P1-201ENST00000503144 1300 ntBASIC20.42■□□□□ 0.86
SCN11AQ9UI33 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.42■□□□□ 0.86
SCN11AQ9UI33 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC20.42■□□□□ 0.86
SCN11AQ9UI33 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCN11AQ9UI33 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SCN11AQ9UI33 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCN11AQ9UI33 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCN11AQ9UI33 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SCN11AQ9UI33 RNA5SP412-201ENST00000516234 123 ntBASIC20.41■□□□□ 0.86
SCN11AQ9UI33 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC20.41■□□□□ 0.86
SCN11AQ9UI33 USB1-203ENST00000539737 1212 ntTSL 2 BASIC20.41■□□□□ 0.86
SCN11AQ9UI33 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC20.41■□□□□ 0.86
SCN11AQ9UI33 AC093813.1-201ENST00000605066 256 ntBASIC20.41■□□□□ 0.86
SCN11AQ9UI33 RHOXF1P1-202ENST00000635473 501 ntBASIC20.41■□□□□ 0.86
SCN11AQ9UI33 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCN11AQ9UI33 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCN11AQ9UI33 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SCN11AQ9UI33 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCN11AQ9UI33 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SCN11AQ9UI33 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
SCN11AQ9UI33 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCN11AQ9UI33 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCN11AQ9UI33 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCN11AQ9UI33 TPO-206ENST00000382269 1155 ntTSL 5 BASIC20.41■□□□□ 0.86
SCN11AQ9UI33 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC20.41■□□□□ 0.86
SCN11AQ9UI33 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCN11AQ9UI33 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC20.41■□□□□ 0.86
SCN11AQ9UI33 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC20.41■□□□□ 0.86
SCN11AQ9UI33 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC20.41■□□□□ 0.86
SCN11AQ9UI33 ENPP7P5-201ENST00000541031 1031 ntBASIC20.41■□□□□ 0.86
SCN11AQ9UI33 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC20.41■□□□□ 0.86
SCN11AQ9UI33 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SCN11AQ9UI33 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SCN11AQ9UI33 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SCN11AQ9UI33 USE1-206ENST00000595101 1776 ntTSL 2 BASIC20.41■□□□□ 0.86
SCN11AQ9UI33 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCN11AQ9UI33 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC20.4■□□□□ 0.86
SCN11AQ9UI33 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SCN11AQ9UI33 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SCN11AQ9UI33 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC20.4■□□□□ 0.86
SCN11AQ9UI33 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SCN11AQ9UI33 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SCN11AQ9UI33 TK1-203ENST00000588734 1681 ntTSL 2 BASIC20.4■□□□□ 0.86
SCN11AQ9UI33 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SCN11AQ9UI33 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SCN11AQ9UI33 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SCN11AQ9UI33 MIR1908-201ENST00000410394 80 ntBASIC20.4■□□□□ 0.86
SCN11AQ9UI33 FAM21FP-201ENST00000426241 1131 ntBASIC20.4■□□□□ 0.86
SCN11AQ9UI33 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC20.4■□□□□ 0.86
SCN11AQ9UI33 PACS1-203ENST00000524815 628 ntTSL 4 BASIC20.4■□□□□ 0.86
SCN11AQ9UI33 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC20.4■□□□□ 0.86
SCN11AQ9UI33 AP000812.2-201ENST00000538934 718 ntBASIC20.4■□□□□ 0.86
SCN11AQ9UI33 RIT1-205ENST00000539040 919 ntTSL 2 BASIC20.4■□□□□ 0.86
SCN11AQ9UI33 AL583810.1-201ENST00000553344 1045 ntBASIC20.4■□□□□ 0.86
SCN11AQ9UI33 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC20.4■□□□□ 0.86
SCN11AQ9UI33 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SCN11AQ9UI33 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
SCN11AQ9UI33 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SCN11AQ9UI33 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SCN11AQ9UI33 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC20.4■□□□□ 0.86
SCN11AQ9UI33 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SCN11AQ9UI33 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
SCN11AQ9UI33 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SCN11AQ9UI33 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
SCN11AQ9UI33 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SCN11AQ9UI33 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SCN11AQ9UI33 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SCN11AQ9UI33 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SCN11AQ9UI33 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC20.39■□□□□ 0.86
SCN11AQ9UI33 ZBTB12BP-201ENST00000314232 1122 ntBASIC20.39■□□□□ 0.86
SCN11AQ9UI33 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC20.39■□□□□ 0.86
SCN11AQ9UI33 CNN2P8-201ENST00000421872 913 ntBASIC20.39■□□□□ 0.86
SCN11AQ9UI33 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SCN11AQ9UI33 FO681548.1-201ENST00000455617 1132 ntBASIC20.39■□□□□ 0.86
SCN11AQ9UI33 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SCN11AQ9UI33 MIR4538-201ENST00000581377 78 ntBASIC20.39■□□□□ 0.86
SCN11AQ9UI33 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.86
SCN11AQ9UI33 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC20.39■□□□□ 0.86
SCN11AQ9UI33 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC20.39■□□□□ 0.86
SCN11AQ9UI33 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
SCN11AQ9UI33 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
SCN11AQ9UI33 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.39■□□□□ 0.85
SCN11AQ9UI33 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
SCN11AQ9UI33 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC20.39■□□□□ 0.85
SCN11AQ9UI33 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCN11AQ9UI33 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
SCN11AQ9UI33 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCN11AQ9UI33 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SCN11AQ9UI33 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SCN11AQ9UI33 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
SCN11AQ9UI33 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC20.39■□□□□ 0.85
SCN11AQ9UI33 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms