Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC18.63■□□□□ 0.57
USP25Q9UHP3 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
USP25Q9UHP3 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP25Q9UHP3 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
USP25Q9UHP3 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18.62■□□□□ 0.57
USP25Q9UHP3 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP25Q9UHP3 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP25Q9UHP3 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC18.62■□□□□ 0.57
USP25Q9UHP3 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP25Q9UHP3 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.62■□□□□ 0.57
USP25Q9UHP3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.62■□□□□ 0.57
USP25Q9UHP3 CXCL1P1-201ENST00000502804 216 ntBASIC18.62■□□□□ 0.57
USP25Q9UHP3 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.62■□□□□ 0.57
USP25Q9UHP3 AL645728.2-201ENST00000641974 660 ntBASIC18.62■□□□□ 0.57
USP25Q9UHP3 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP25Q9UHP3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP25Q9UHP3 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP25Q9UHP3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
USP25Q9UHP3 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
USP25Q9UHP3 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP25Q9UHP3 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.62■□□□□ 0.57
USP25Q9UHP3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP25Q9UHP3 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP25Q9UHP3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP25Q9UHP3 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP25Q9UHP3 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.62■□□□□ 0.57
USP25Q9UHP3 C1R-202ENST00000536053 2347 ntTSL 2 BASIC18.62■□□□□ 0.57
USP25Q9UHP3 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP25Q9UHP3 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP25Q9UHP3 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP25Q9UHP3 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP25Q9UHP3 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP25Q9UHP3 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
USP25Q9UHP3 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP25Q9UHP3 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP25Q9UHP3 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP25Q9UHP3 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP25Q9UHP3 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP25Q9UHP3 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
USP25Q9UHP3 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC18.61■□□□□ 0.57
USP25Q9UHP3 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.61■□□□□ 0.57
USP25Q9UHP3 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP25Q9UHP3 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC18.61■□□□□ 0.57
USP25Q9UHP3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP25Q9UHP3 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP25Q9UHP3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP25Q9UHP3 AC069224.1-201ENST00000566372 1715 ntBASIC18.61■□□□□ 0.57
USP25Q9UHP3 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
USP25Q9UHP3 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
USP25Q9UHP3 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
USP25Q9UHP3 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP25Q9UHP3 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP25Q9UHP3 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.61■□□□□ 0.57
USP25Q9UHP3 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.61■□□□□ 0.57
USP25Q9UHP3 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.61■□□□□ 0.57
USP25Q9UHP3 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP25Q9UHP3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
USP25Q9UHP3 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.61■□□□□ 0.57
USP25Q9UHP3 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
USP25Q9UHP3 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
USP25Q9UHP3 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP25Q9UHP3 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.61■□□□□ 0.57
USP25Q9UHP3 AL773604.1-201ENST00000617417 272 ntBASIC18.61■□□□□ 0.57
USP25Q9UHP3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.61■□□□□ 0.57
USP25Q9UHP3 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP25Q9UHP3 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP25Q9UHP3 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
USP25Q9UHP3 SNX18-202ENST00000343017 3140 ntBASIC18.61■□□□□ 0.57
USP25Q9UHP3 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC18.61■□□□□ 0.57
USP25Q9UHP3 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
USP25Q9UHP3 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP25Q9UHP3 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP25Q9UHP3 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
USP25Q9UHP3 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP25Q9UHP3 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC18.61■□□□□ 0.57
USP25Q9UHP3 AC136621.1-201ENST00000624017 2304 ntBASIC18.61■□□□□ 0.57
USP25Q9UHP3 SSR4P1-203ENST00000599569 2260 ntBASIC18.61■□□□□ 0.57
USP25Q9UHP3 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
USP25Q9UHP3 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.6■□□□□ 0.57
USP25Q9UHP3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP25Q9UHP3 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
USP25Q9UHP3 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP25Q9UHP3 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
USP25Q9UHP3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP25Q9UHP3 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP25Q9UHP3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.6■□□□□ 0.57
USP25Q9UHP3 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP25Q9UHP3 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP25Q9UHP3 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.6■□□□□ 0.57
USP25Q9UHP3 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP25Q9UHP3 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP25Q9UHP3 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
USP25Q9UHP3 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.6■□□□□ 0.57
USP25Q9UHP3 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.6■□□□□ 0.57
USP25Q9UHP3 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.6■□□□□ 0.57
USP25Q9UHP3 RNU1-129P-201ENST00000384064 167 ntBASIC18.6■□□□□ 0.57
USP25Q9UHP3 PMS2P4-201ENST00000412466 1052 ntBASIC18.6■□□□□ 0.57
USP25Q9UHP3 AC079781.3-201ENST00000449110 356 ntBASIC18.6■□□□□ 0.57
USP25Q9UHP3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.6■□□□□ 0.57
USP25Q9UHP3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms