Protein–RNA interactions for Protein: Q9UBT3

DKK4, Dickkopf-related protein 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK4Q9UBT3 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC14.87□□□□□ -0.03
DKK4Q9UBT3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
DKK4Q9UBT3 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DKK4Q9UBT3 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
DKK4Q9UBT3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DKK4Q9UBT3 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.87□□□□□ -0.03
DKK4Q9UBT3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC14.87□□□□□ -0.03
DKK4Q9UBT3 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC14.87□□□□□ -0.03
DKK4Q9UBT3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.87□□□□□ -0.03
DKK4Q9UBT3 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC14.87□□□□□ -0.03
DKK4Q9UBT3 AC092978.1-202ENST00000637590 1327 ntBASIC14.87□□□□□ -0.03
DKK4Q9UBT3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DKK4Q9UBT3 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
DKK4Q9UBT3 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
DKK4Q9UBT3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC14.87□□□□□ -0.03
DKK4Q9UBT3 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
DKK4Q9UBT3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC14.86□□□□□ -0.03
DKK4Q9UBT3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DKK4Q9UBT3 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.86□□□□□ -0.03
DKK4Q9UBT3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
DKK4Q9UBT3 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DKK4Q9UBT3 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.86□□□□□ -0.03
DKK4Q9UBT3 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
DKK4Q9UBT3 FAM197Y7-201ENST00000432892 766 ntBASIC14.86□□□□□ -0.03
DKK4Q9UBT3 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
DKK4Q9UBT3 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.86□□□□□ -0.03
DKK4Q9UBT3 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.86□□□□□ -0.03
DKK4Q9UBT3 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.86□□□□□ -0.03
DKK4Q9UBT3 IMP3P2-201ENST00000489760 475 ntBASIC14.86□□□□□ -0.03
DKK4Q9UBT3 SLED1-202ENST00000512051 380 ntBASIC14.86□□□□□ -0.03
DKK4Q9UBT3 AC026410.3-201ENST00000514280 936 ntBASIC14.86□□□□□ -0.03
DKK4Q9UBT3 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.86□□□□□ -0.03
DKK4Q9UBT3 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.86□□□□□ -0.03
DKK4Q9UBT3 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.86□□□□□ -0.03
DKK4Q9UBT3 AC243562.2-201ENST00000561247 970 ntBASIC14.86□□□□□ -0.03
DKK4Q9UBT3 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.86□□□□□ -0.03
DKK4Q9UBT3 MIR5572-201ENST00000583188 137 ntBASIC14.86□□□□□ -0.03
DKK4Q9UBT3 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.86□□□□□ -0.03
DKK4Q9UBT3 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
DKK4Q9UBT3 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.86□□□□□ -0.03
DKK4Q9UBT3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DKK4Q9UBT3 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.86□□□□□ -0.03
DKK4Q9UBT3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.86□□□□□ -0.03
DKK4Q9UBT3 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
DKK4Q9UBT3 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DKK4Q9UBT3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
DKK4Q9UBT3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DKK4Q9UBT3 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DKK4Q9UBT3 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
DKK4Q9UBT3 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DKK4Q9UBT3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
DKK4Q9UBT3 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.86□□□□□ -0.03
DKK4Q9UBT3 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DKK4Q9UBT3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
DKK4Q9UBT3 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DKK4Q9UBT3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
DKK4Q9UBT3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.86□□□□□ -0.03
DKK4Q9UBT3 RNF165-205ENST00000588679 2904 ntBASIC14.86□□□□□ -0.03
DKK4Q9UBT3 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 AL031731.1-201ENST00000642131 2094 ntBASIC14.85□□□□□ -0.03
DKK4Q9UBT3 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 MPV17-204ENST00000399052 749 ntTSL 4 BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 HLA-DQB2-229ENST00000411527 1059 ntBASIC14.85□□□□□ -0.03
DKK4Q9UBT3 AL008707.1-201ENST00000422498 534 ntBASIC14.85□□□□□ -0.03
DKK4Q9UBT3 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 HNRNPUP1-201ENST00000554987 333 ntBASIC14.85□□□□□ -0.03
DKK4Q9UBT3 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 AL096828.3-201ENST00000615354 462 ntBASIC14.85□□□□□ -0.03
DKK4Q9UBT3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms