Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CALCOCO1Q9P1Z2 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.8■□□□□ 0.44
CALCOCO1Q9P1Z2 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.8■□□□□ 0.44
CALCOCO1Q9P1Z2 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CALCOCO1Q9P1Z2 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.8■□□□□ 0.44
CALCOCO1Q9P1Z2 OR7E47P-204ENST00000575924 449 ntBASIC17.8■□□□□ 0.44
CALCOCO1Q9P1Z2 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.8■□□□□ 0.44
CALCOCO1Q9P1Z2 AC008667.4-201ENST00000607370 168 ntBASIC17.8■□□□□ 0.44
CALCOCO1Q9P1Z2 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
CALCOCO1Q9P1Z2 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.8■□□□□ 0.44
CALCOCO1Q9P1Z2 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CALCOCO1Q9P1Z2 PI4KAP1-204ENST00000612579 1703 ntBASIC17.8■□□□□ 0.44
CALCOCO1Q9P1Z2 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.8■□□□□ 0.44
CALCOCO1Q9P1Z2 AC092364.2-201ENST00000596710 2692 ntBASIC17.8■□□□□ 0.44
CALCOCO1Q9P1Z2 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CALCOCO1Q9P1Z2 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CALCOCO1Q9P1Z2 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CALCOCO1Q9P1Z2 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CALCOCO1Q9P1Z2 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.8■□□□□ 0.44
CALCOCO1Q9P1Z2 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CALCOCO1Q9P1Z2 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 AC026748.1-201ENST00000624349 3251 ntBASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 DNAJB3-201ENST00000446806 729 ntBASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 AC124947.2-201ENST00000547118 1133 ntBASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 MIR3687-2-201ENST00000577708 61 ntBASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 MIR3687-1-201ENST00000614492 61 ntBASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 AC005593.1-201ENST00000624894 515 ntBASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CALCOCO1Q9P1Z2 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CALCOCO1Q9P1Z2 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CALCOCO1Q9P1Z2 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CALCOCO1Q9P1Z2 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CALCOCO1Q9P1Z2 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CALCOCO1Q9P1Z2 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CALCOCO1Q9P1Z2 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CALCOCO1Q9P1Z2 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CALCOCO1Q9P1Z2 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CALCOCO1Q9P1Z2 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CALCOCO1Q9P1Z2 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CALCOCO1Q9P1Z2 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
CALCOCO1Q9P1Z2 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.78■□□□□ 0.44
CALCOCO1Q9P1Z2 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CALCOCO1Q9P1Z2 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CALCOCO1Q9P1Z2 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.78■□□□□ 0.44
CALCOCO1Q9P1Z2 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CALCOCO1Q9P1Z2 AC087163.2-201ENST00000457299 853 ntBASIC17.78■□□□□ 0.44
CALCOCO1Q9P1Z2 AC108073.2-201ENST00000464002 357 ntBASIC17.78■□□□□ 0.44
CALCOCO1Q9P1Z2 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
CALCOCO1Q9P1Z2 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.78■□□□□ 0.44
CALCOCO1Q9P1Z2 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.78■□□□□ 0.44
CALCOCO1Q9P1Z2 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CALCOCO1Q9P1Z2 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.78■□□□□ 0.44
CALCOCO1Q9P1Z2 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CALCOCO1Q9P1Z2 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CALCOCO1Q9P1Z2 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CALCOCO1Q9P1Z2 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CALCOCO1Q9P1Z2 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CALCOCO1Q9P1Z2 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CALCOCO1Q9P1Z2 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.78■□□□□ 0.44
CALCOCO1Q9P1Z2 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CALCOCO1Q9P1Z2 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms