Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.11■□□□□ 0.17
TREX1Q9NSU2 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.11■□□□□ 0.17
TREX1Q9NSU2 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TREX1Q9NSU2 AL136982.4-201ENST00000437689 1740 ntBASIC16.11■□□□□ 0.17
TREX1Q9NSU2 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
TREX1Q9NSU2 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
TREX1Q9NSU2 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TREX1Q9NSU2 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TREX1Q9NSU2 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.11■□□□□ 0.17
TREX1Q9NSU2 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
TREX1Q9NSU2 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TREX1Q9NSU2 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TREX1Q9NSU2 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TREX1Q9NSU2 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TREX1Q9NSU2 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TREX1Q9NSU2 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.11■□□□□ 0.17
TREX1Q9NSU2 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.11■□□□□ 0.17
TREX1Q9NSU2 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.11■□□□□ 0.17
TREX1Q9NSU2 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.11■□□□□ 0.17
TREX1Q9NSU2 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.11■□□□□ 0.17
TREX1Q9NSU2 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.11■□□□□ 0.17
TREX1Q9NSU2 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.11■□□□□ 0.17
TREX1Q9NSU2 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.11■□□□□ 0.17
TREX1Q9NSU2 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TREX1Q9NSU2 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.11■□□□□ 0.17
TREX1Q9NSU2 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.11■□□□□ 0.17
TREX1Q9NSU2 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.11■□□□□ 0.17
TREX1Q9NSU2 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.11■□□□□ 0.17
TREX1Q9NSU2 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.11■□□□□ 0.17
TREX1Q9NSU2 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TREX1Q9NSU2 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.11■□□□□ 0.17
TREX1Q9NSU2 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.11■□□□□ 0.17
TREX1Q9NSU2 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TREX1Q9NSU2 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TREX1Q9NSU2 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.11■□□□□ 0.17
TREX1Q9NSU2 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TREX1Q9NSU2 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TREX1Q9NSU2 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TREX1Q9NSU2 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TREX1Q9NSU2 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.11■□□□□ 0.17
TREX1Q9NSU2 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.11■□□□□ 0.17
TREX1Q9NSU2 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 UXT-AS1-201ENST00000590504 1525 ntBASIC16.1■□□□□ 0.17
TREX1Q9NSU2 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 AP3S2-216ENST00000617003 1561 ntBASIC16.1■□□□□ 0.17
TREX1Q9NSU2 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 DNAJB3-201ENST00000446806 729 ntBASIC16.1■□□□□ 0.17
TREX1Q9NSU2 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 CEND1P1-201ENST00000451006 455 ntBASIC16.1■□□□□ 0.17
TREX1Q9NSU2 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 AL513210.1-201ENST00000629608 234 ntBASIC16.1■□□□□ 0.17
TREX1Q9NSU2 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
TREX1Q9NSU2 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.09■□□□□ 0.17
TREX1Q9NSU2 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TREX1Q9NSU2 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TREX1Q9NSU2 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TREX1Q9NSU2 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TREX1Q9NSU2 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TREX1Q9NSU2 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TREX1Q9NSU2 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TREX1Q9NSU2 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms