Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GCM1Q9NP62 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.89□□□□□ -0.19
GCM1Q9NP62 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.89□□□□□ -0.19
GCM1Q9NP62 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GCM1Q9NP62 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GCM1Q9NP62 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GCM1Q9NP62 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GCM1Q9NP62 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.89□□□□□ -0.19
GCM1Q9NP62 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.89□□□□□ -0.19
GCM1Q9NP62 KRT18P32-201ENST00000424695 1287 ntBASIC13.89□□□□□ -0.19
GCM1Q9NP62 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.89□□□□□ -0.19
GCM1Q9NP62 AC093724.1-201ENST00000448659 1027 ntBASIC13.89□□□□□ -0.19
GCM1Q9NP62 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.89□□□□□ -0.19
GCM1Q9NP62 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GCM1Q9NP62 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.89□□□□□ -0.19
GCM1Q9NP62 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.89□□□□□ -0.19
GCM1Q9NP62 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.89□□□□□ -0.19
GCM1Q9NP62 AC027612.4-201ENST00000605371 583 ntBASIC13.89□□□□□ -0.19
GCM1Q9NP62 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GCM1Q9NP62 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
GCM1Q9NP62 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GCM1Q9NP62 AC005052.1-201ENST00000625181 2492 ntBASIC13.89□□□□□ -0.19
GCM1Q9NP62 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
GCM1Q9NP62 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
GCM1Q9NP62 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
GCM1Q9NP62 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
GCM1Q9NP62 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
GCM1Q9NP62 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GCM1Q9NP62 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GCM1Q9NP62 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.89□□□□□ -0.19
GCM1Q9NP62 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
GCM1Q9NP62 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GCM1Q9NP62 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GCM1Q9NP62 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GCM1Q9NP62 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
GCM1Q9NP62 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GCM1Q9NP62 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
GCM1Q9NP62 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GCM1Q9NP62 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
GCM1Q9NP62 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.88□□□□□ -0.19
GCM1Q9NP62 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
GCM1Q9NP62 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GCM1Q9NP62 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
GCM1Q9NP62 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
GCM1Q9NP62 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GCM1Q9NP62 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GCM1Q9NP62 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GCM1Q9NP62 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
GCM1Q9NP62 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
GCM1Q9NP62 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
GCM1Q9NP62 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
GCM1Q9NP62 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
GCM1Q9NP62 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC13.88□□□□□ -0.19
GCM1Q9NP62 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
GCM1Q9NP62 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GCM1Q9NP62 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
GCM1Q9NP62 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GCM1Q9NP62 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GCM1Q9NP62 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
GCM1Q9NP62 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GCM1Q9NP62 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GCM1Q9NP62 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GCM1Q9NP62 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GCM1Q9NP62 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
GCM1Q9NP62 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GCM1Q9NP62 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GCM1Q9NP62 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GCM1Q9NP62 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GCM1Q9NP62 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
GCM1Q9NP62 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GCM1Q9NP62 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.88□□□□□ -0.19
GCM1Q9NP62 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.88□□□□□ -0.19
GCM1Q9NP62 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.88□□□□□ -0.19
GCM1Q9NP62 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.88□□□□□ -0.19
GCM1Q9NP62 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.88□□□□□ -0.19
GCM1Q9NP62 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.88□□□□□ -0.19
GCM1Q9NP62 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.88□□□□□ -0.19
GCM1Q9NP62 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.88□□□□□ -0.19
GCM1Q9NP62 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.88□□□□□ -0.19
GCM1Q9NP62 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GCM1Q9NP62 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.88□□□□□ -0.19
GCM1Q9NP62 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.88□□□□□ -0.19
GCM1Q9NP62 AC009093.7-201ENST00000623853 1223 ntBASIC13.88□□□□□ -0.19
GCM1Q9NP62 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.88□□□□□ -0.19
GCM1Q9NP62 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
GCM1Q9NP62 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GCM1Q9NP62 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GCM1Q9NP62 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GCM1Q9NP62 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
GCM1Q9NP62 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GCM1Q9NP62 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.88□□□□□ -0.19
GCM1Q9NP62 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GCM1Q9NP62 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GCM1Q9NP62 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
GCM1Q9NP62 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
GCM1Q9NP62 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
GCM1Q9NP62 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
GCM1Q9NP62 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.87□□□□□ -0.19
GCM1Q9NP62 AC005622.1-201ENST00000636801 1703 ntBASIC13.87□□□□□ -0.19
GCM1Q9NP62 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms