Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 DNAJB3-202ENST00000449667 1266 ntBASIC14.22□□□□□ -0.13
CDH20Q9HBT6 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 AC139530.3-201ENST00000620344 690 ntBASIC14.22□□□□□ -0.13
CDH20Q9HBT6 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.22□□□□□ -0.13
CDH20Q9HBT6 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 AC069335.1-201ENST00000489972 472 ntBASIC14.21□□□□□ -0.13
CDH20Q9HBT6 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 AP000842.3-202ENST00000569238 1080 ntBASIC14.21□□□□□ -0.13
CDH20Q9HBT6 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 AC073389.1-201ENST00000595595 795 ntBASIC14.21□□□□□ -0.13
CDH20Q9HBT6 GPALPP1-207ENST00000611650 899 ntBASIC14.21□□□□□ -0.13
CDH20Q9HBT6 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDH20Q9HBT6 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDH20Q9HBT6 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.21□□□□□ -0.14
CDH20Q9HBT6 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDH20Q9HBT6 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CDH20Q9HBT6 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDH20Q9HBT6 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.21□□□□□ -0.14
CDH20Q9HBT6 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDH20Q9HBT6 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
CDH20Q9HBT6 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDH20Q9HBT6 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.21□□□□□ -0.14
CDH20Q9HBT6 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.21□□□□□ -0.14
CDH20Q9HBT6 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
CDH20Q9HBT6 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDH20Q9HBT6 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CDH20Q9HBT6 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms