Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLK4Q9HAZ1 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLK4Q9HAZ1 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLK4Q9HAZ1 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.84■□□□□ 0.13
CLK4Q9HAZ1 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLK4Q9HAZ1 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLK4Q9HAZ1 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.84■□□□□ 0.13
CLK4Q9HAZ1 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLK4Q9HAZ1 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CLK4Q9HAZ1 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
CLK4Q9HAZ1 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLK4Q9HAZ1 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLK4Q9HAZ1 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.84■□□□□ 0.13
CLK4Q9HAZ1 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLK4Q9HAZ1 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLK4Q9HAZ1 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLK4Q9HAZ1 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLK4Q9HAZ1 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLK4Q9HAZ1 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.84■□□□□ 0.13
CLK4Q9HAZ1 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLK4Q9HAZ1 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CLK4Q9HAZ1 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLK4Q9HAZ1 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLK4Q9HAZ1 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLK4Q9HAZ1 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.83■□□□□ 0.13
CLK4Q9HAZ1 FAM45BP-202ENST00000592932 1624 ntBASIC15.83■□□□□ 0.13
CLK4Q9HAZ1 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLK4Q9HAZ1 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLK4Q9HAZ1 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLK4Q9HAZ1 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.83■□□□□ 0.12
CLK4Q9HAZ1 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLK4Q9HAZ1 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLK4Q9HAZ1 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CLK4Q9HAZ1 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.83■□□□□ 0.12
CLK4Q9HAZ1 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLK4Q9HAZ1 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLK4Q9HAZ1 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.83■□□□□ 0.12
CLK4Q9HAZ1 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLK4Q9HAZ1 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLK4Q9HAZ1 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLK4Q9HAZ1 YBX2P1-201ENST00000394192 760 ntBASIC15.83■□□□□ 0.12
CLK4Q9HAZ1 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.83■□□□□ 0.12
CLK4Q9HAZ1 AC023274.1-201ENST00000418278 595 ntBASIC15.83■□□□□ 0.12
CLK4Q9HAZ1 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.83■□□□□ 0.12
CLK4Q9HAZ1 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.83■□□□□ 0.12
CLK4Q9HAZ1 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.83■□□□□ 0.12
CLK4Q9HAZ1 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLK4Q9HAZ1 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.83■□□□□ 0.12
CLK4Q9HAZ1 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLK4Q9HAZ1 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CLK4Q9HAZ1 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLK4Q9HAZ1 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLK4Q9HAZ1 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CLK4Q9HAZ1 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CLK4Q9HAZ1 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.83■□□□□ 0.12
CLK4Q9HAZ1 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.83■□□□□ 0.12
CLK4Q9HAZ1 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLK4Q9HAZ1 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.83■□□□□ 0.12
CLK4Q9HAZ1 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLK4Q9HAZ1 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLK4Q9HAZ1 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
CLK4Q9HAZ1 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLK4Q9HAZ1 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLK4Q9HAZ1 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.82■□□□□ 0.12
CLK4Q9HAZ1 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLK4Q9HAZ1 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLK4Q9HAZ1 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.82■□□□□ 0.12
CLK4Q9HAZ1 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLK4Q9HAZ1 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CLK4Q9HAZ1 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CLK4Q9HAZ1 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLK4Q9HAZ1 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.82■□□□□ 0.12
CLK4Q9HAZ1 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLK4Q9HAZ1 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.82■□□□□ 0.12
CLK4Q9HAZ1 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLK4Q9HAZ1 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
CLK4Q9HAZ1 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLK4Q9HAZ1 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLK4Q9HAZ1 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLK4Q9HAZ1 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.82■□□□□ 0.12
CLK4Q9HAZ1 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLK4Q9HAZ1 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
CLK4Q9HAZ1 BX842568.4-201ENST00000421222 227 ntBASIC15.82■□□□□ 0.12
CLK4Q9HAZ1 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
CLK4Q9HAZ1 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CLK4Q9HAZ1 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLK4Q9HAZ1 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.82■□□□□ 0.12
CLK4Q9HAZ1 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.82■□□□□ 0.12
CLK4Q9HAZ1 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLK4Q9HAZ1 AP002472.1-201ENST00000577490 586 ntBASIC15.82■□□□□ 0.12
CLK4Q9HAZ1 MIR3687-2-201ENST00000577708 61 ntBASIC15.82■□□□□ 0.12
CLK4Q9HAZ1 AL009183.1-201ENST00000603760 355 ntBASIC15.82■□□□□ 0.12
CLK4Q9HAZ1 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.82■□□□□ 0.12
CLK4Q9HAZ1 AL031055.1-201ENST00000606362 631 ntBASIC15.82■□□□□ 0.12
CLK4Q9HAZ1 MIR3687-1-201ENST00000614492 61 ntBASIC15.82■□□□□ 0.12
CLK4Q9HAZ1 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLK4Q9HAZ1 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.82■□□□□ 0.12
CLK4Q9HAZ1 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLK4Q9HAZ1 TNRC18P2-201ENST00000417666 2714 ntBASIC15.82■□□□□ 0.12
CLK4Q9HAZ1 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms