Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.47■□□□□ 0.23
LRRC40Q9H9A6 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC40Q9H9A6 RN7SL589P-201ENST00000481268 310 ntBASIC16.47■□□□□ 0.23
LRRC40Q9H9A6 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.47■□□□□ 0.23
LRRC40Q9H9A6 AL135744.1-201ENST00000565098 629 ntBASIC16.47■□□□□ 0.23
LRRC40Q9H9A6 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.47■□□□□ 0.23
LRRC40Q9H9A6 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.47■□□□□ 0.23
LRRC40Q9H9A6 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
LRRC40Q9H9A6 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC40Q9H9A6 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC40Q9H9A6 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC40Q9H9A6 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.47■□□□□ 0.23
LRRC40Q9H9A6 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC40Q9H9A6 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC40Q9H9A6 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC40Q9H9A6 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
LRRC40Q9H9A6 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC40Q9H9A6 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
LRRC40Q9H9A6 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC40Q9H9A6 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
LRRC40Q9H9A6 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC40Q9H9A6 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.46■□□□□ 0.23
LRRC40Q9H9A6 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC40Q9H9A6 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC40Q9H9A6 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.46■□□□□ 0.23
LRRC40Q9H9A6 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC40Q9H9A6 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.46■□□□□ 0.23
LRRC40Q9H9A6 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC40Q9H9A6 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC40Q9H9A6 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.46■□□□□ 0.23
LRRC40Q9H9A6 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC40Q9H9A6 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC40Q9H9A6 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC40Q9H9A6 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC40Q9H9A6 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC40Q9H9A6 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC40Q9H9A6 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
LRRC40Q9H9A6 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC40Q9H9A6 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC40Q9H9A6 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.46■□□□□ 0.23
LRRC40Q9H9A6 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.46■□□□□ 0.23
LRRC40Q9H9A6 TFAMP1-201ENST00000412727 736 ntBASIC16.46■□□□□ 0.23
LRRC40Q9H9A6 MCCD1P2-201ENST00000423228 335 ntBASIC16.46■□□□□ 0.23
LRRC40Q9H9A6 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.46■□□□□ 0.23
LRRC40Q9H9A6 AC098859.1-201ENST00000502915 1238 ntBASIC16.46■□□□□ 0.23
LRRC40Q9H9A6 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.46■□□□□ 0.23
LRRC40Q9H9A6 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.46■□□□□ 0.23
LRRC40Q9H9A6 AL138918.1-201ENST00000568306 659 ntBASIC16.46■□□□□ 0.23
LRRC40Q9H9A6 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.46■□□□□ 0.23
LRRC40Q9H9A6 AC008267.7-201ENST00000624570 1194 ntBASIC16.46■□□□□ 0.23
LRRC40Q9H9A6 AC092902.6-201ENST00000641783 218 ntBASIC16.46■□□□□ 0.23
LRRC40Q9H9A6 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC40Q9H9A6 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC40Q9H9A6 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.46■□□□□ 0.23
LRRC40Q9H9A6 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC40Q9H9A6 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.46■□□□□ 0.22
LRRC40Q9H9A6 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
LRRC40Q9H9A6 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.45■□□□□ 0.22
LRRC40Q9H9A6 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC40Q9H9A6 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
LRRC40Q9H9A6 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC40Q9H9A6 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC40Q9H9A6 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.45■□□□□ 0.22
LRRC40Q9H9A6 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC40Q9H9A6 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
LRRC40Q9H9A6 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.45■□□□□ 0.22
LRRC40Q9H9A6 MIR574-201ENST00000385209 96 ntBASIC16.45■□□□□ 0.22
LRRC40Q9H9A6 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC40Q9H9A6 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.45■□□□□ 0.22
LRRC40Q9H9A6 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.45■□□□□ 0.22
LRRC40Q9H9A6 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.45■□□□□ 0.22
LRRC40Q9H9A6 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.45■□□□□ 0.22
LRRC40Q9H9A6 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.45■□□□□ 0.22
LRRC40Q9H9A6 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.45■□□□□ 0.22
LRRC40Q9H9A6 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC40Q9H9A6 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC40Q9H9A6 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC40Q9H9A6 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.45■□□□□ 0.22
LRRC40Q9H9A6 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
LRRC40Q9H9A6 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC40Q9H9A6 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
LRRC40Q9H9A6 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.45■□□□□ 0.22
LRRC40Q9H9A6 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
LRRC40Q9H9A6 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LRRC40Q9H9A6 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.45■□□□□ 0.22
LRRC40Q9H9A6 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LRRC40Q9H9A6 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC40Q9H9A6 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
LRRC40Q9H9A6 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC40Q9H9A6 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.45■□□□□ 0.22
LRRC40Q9H9A6 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LRRC40Q9H9A6 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
LRRC40Q9H9A6 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
LRRC40Q9H9A6 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
LRRC40Q9H9A6 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LRRC40Q9H9A6 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.45■□□□□ 0.22
LRRC40Q9H9A6 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC40Q9H9A6 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC40Q9H9A6 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRC40Q9H9A6 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms