Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LHX5Q9H2C1 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LHX5Q9H2C1 BNIP3P1-202ENST00000550043 1585 ntBASIC17.04■□□□□ 0.32
LHX5Q9H2C1 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LHX5Q9H2C1 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LHX5Q9H2C1 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.04■□□□□ 0.32
LHX5Q9H2C1 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LHX5Q9H2C1 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.04■□□□□ 0.32
LHX5Q9H2C1 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.04■□□□□ 0.32
LHX5Q9H2C1 AL353705.2-201ENST00000428243 662 ntBASIC17.04■□□□□ 0.32
LHX5Q9H2C1 HLA-J-203ENST00000494367 1087 ntBASIC17.04■□□□□ 0.32
LHX5Q9H2C1 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.04■□□□□ 0.32
LHX5Q9H2C1 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.04■□□□□ 0.32
LHX5Q9H2C1 AC025678.2-201ENST00000562061 970 ntBASIC17.04■□□□□ 0.32
LHX5Q9H2C1 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LHX5Q9H2C1 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.04■□□□□ 0.32
LHX5Q9H2C1 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.04■□□□□ 0.32
LHX5Q9H2C1 LINC00628-201ENST00000628516 1289 ntBASIC17.04■□□□□ 0.32
LHX5Q9H2C1 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LHX5Q9H2C1 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
LHX5Q9H2C1 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.04■□□□□ 0.32
LHX5Q9H2C1 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.04■□□□□ 0.32
LHX5Q9H2C1 AC008894.3-201ENST00000624324 3103 ntBASIC17.04■□□□□ 0.32
LHX5Q9H2C1 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LHX5Q9H2C1 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LHX5Q9H2C1 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LHX5Q9H2C1 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LHX5Q9H2C1 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 MIR770-201ENST00000390219 98 ntBASIC17.03■□□□□ 0.32
LHX5Q9H2C1 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 AC007967.4-201ENST00000614700 386 ntBASIC17.03■□□□□ 0.32
LHX5Q9H2C1 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
LHX5Q9H2C1 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LHX5Q9H2C1 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LHX5Q9H2C1 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LHX5Q9H2C1 CYP4F24P-201ENST00000586049 1580 ntBASIC17.02■□□□□ 0.32
LHX5Q9H2C1 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LHX5Q9H2C1 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LHX5Q9H2C1 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.02■□□□□ 0.32
LHX5Q9H2C1 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LHX5Q9H2C1 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
LHX5Q9H2C1 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
LHX5Q9H2C1 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
LHX5Q9H2C1 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
LHX5Q9H2C1 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.02■□□□□ 0.32
LHX5Q9H2C1 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.02■□□□□ 0.32
LHX5Q9H2C1 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LHX5Q9H2C1 EEF1DP4-201ENST00000446006 880 ntBASIC17.02■□□□□ 0.32
LHX5Q9H2C1 AC109322.1-201ENST00000524499 1264 ntBASIC17.02■□□□□ 0.32
LHX5Q9H2C1 BANF1P1-201ENST00000553684 263 ntBASIC17.02■□□□□ 0.32
LHX5Q9H2C1 AC105021.1-202ENST00000570572 669 ntBASIC17.02■□□□□ 0.32
LHX5Q9H2C1 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.02■□□□□ 0.32
LHX5Q9H2C1 LINC02084-201ENST00000606069 1096 ntBASIC17.02■□□□□ 0.32
LHX5Q9H2C1 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
LHX5Q9H2C1 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.02■□□□□ 0.32
LHX5Q9H2C1 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.02■□□□□ 0.32
LHX5Q9H2C1 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms