Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SLIRPQ9GZT3 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLIRPQ9GZT3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.26□□□□□ -0.13
SLIRPQ9GZT3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SLIRPQ9GZT3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLIRPQ9GZT3 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.26□□□□□ -0.13
SLIRPQ9GZT3 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLIRPQ9GZT3 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
SLIRPQ9GZT3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.26□□□□□ -0.13
SLIRPQ9GZT3 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SLIRPQ9GZT3 AL020989.1-201ENST00000422979 469 ntBASIC14.26□□□□□ -0.13
SLIRPQ9GZT3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
SLIRPQ9GZT3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC14.26□□□□□ -0.13
SLIRPQ9GZT3 RNF126P1-202ENST00000569893 925 ntBASIC14.26□□□□□ -0.13
SLIRPQ9GZT3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC14.26□□□□□ -0.13
SLIRPQ9GZT3 CYP2A7P1-201ENST00000595391 815 ntBASIC14.26□□□□□ -0.13
SLIRPQ9GZT3 AL023973.1-201ENST00000624619 620 ntBASIC14.26□□□□□ -0.13
SLIRPQ9GZT3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
SLIRPQ9GZT3 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
SLIRPQ9GZT3 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.26□□□□□ -0.13
SLIRPQ9GZT3 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SLIRPQ9GZT3 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLIRPQ9GZT3 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.26□□□□□ -0.13
SLIRPQ9GZT3 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLIRPQ9GZT3 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SLIRPQ9GZT3 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLIRPQ9GZT3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.26□□□□□ -0.13
SLIRPQ9GZT3 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLIRPQ9GZT3 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLIRPQ9GZT3 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLIRPQ9GZT3 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.26□□□□□ -0.13
SLIRPQ9GZT3 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.26□□□□□ -0.13
SLIRPQ9GZT3 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLIRPQ9GZT3 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLIRPQ9GZT3 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLIRPQ9GZT3 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 U82695.1-201ENST00000635752 1889 ntBASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 RN7SL606P-201ENST00000472779 293 ntBASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 AC091167.2-201ENST00000579581 588 ntBASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 CICP17-201ENST00000418553 2377 ntBASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 ZBED1P1-201ENST00000502364 1930 ntBASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
SLIRPQ9GZT3 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.24□□□□□ -0.13
SLIRPQ9GZT3 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.24□□□□□ -0.13
SLIRPQ9GZT3 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLIRPQ9GZT3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLIRPQ9GZT3 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLIRPQ9GZT3 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLIRPQ9GZT3 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLIRPQ9GZT3 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.24□□□□□ -0.13
SLIRPQ9GZT3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC14.24□□□□□ -0.13
SLIRPQ9GZT3 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms