Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 AC103564.2-201ENST00000432853 1299 ntBASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 THAP5-204ENST00000438865 868 ntTSL 2 BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 DANCR-204ENST00000444958 709 ntTSL 3 BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 AL662844.1-201ENST00000546340 181 ntBASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 AL160237.2-201ENST00000556165 472 ntBASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 AC064862.7-201ENST00000604520 867 ntBASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 HARS-204ENST00000438307 1789 ntTSL 2 BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NDUFAF3Q9BU61 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 LINC01101-201ENST00000622953 1884 ntBASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 AC006538.1-201ENST00000567905 1585 ntBASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 SAPCD2P3-201ENST00000455031 850 ntBASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 AL121912.1-201ENST00000603683 238 ntBASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 AL591684.3-201ENST00000605187 298 ntBASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 AL031008.1-201ENST00000619963 541 ntBASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFAF3Q9BU61 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFAF3Q9BU61 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms