Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
EBF4Q9BQW3 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
EBF4Q9BQW3 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
EBF4Q9BQW3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
EBF4Q9BQW3 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
EBF4Q9BQW3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
EBF4Q9BQW3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
EBF4Q9BQW3 AC129492.6-201ENST00000611383 1305 ntBASIC15.83■□□□□ 0.12
EBF4Q9BQW3 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.83■□□□□ 0.12
EBF4Q9BQW3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.83■□□□□ 0.12
EBF4Q9BQW3 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.83■□□□□ 0.12
EBF4Q9BQW3 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
EBF4Q9BQW3 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
EBF4Q9BQW3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EBF4Q9BQW3 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.82■□□□□ 0.12
EBF4Q9BQW3 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.82■□□□□ 0.12
EBF4Q9BQW3 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
EBF4Q9BQW3 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
EBF4Q9BQW3 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.82■□□□□ 0.12
EBF4Q9BQW3 AC112693.3-201ENST00000624819 1983 ntBASIC15.82■□□□□ 0.12
EBF4Q9BQW3 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EBF4Q9BQW3 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EBF4Q9BQW3 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
EBF4Q9BQW3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EBF4Q9BQW3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.82■□□□□ 0.12
EBF4Q9BQW3 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
EBF4Q9BQW3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
EBF4Q9BQW3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.82■□□□□ 0.12
EBF4Q9BQW3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
EBF4Q9BQW3 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
EBF4Q9BQW3 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EBF4Q9BQW3 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
EBF4Q9BQW3 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EBF4Q9BQW3 CICP23-201ENST00000605013 2741 ntBASIC15.82■□□□□ 0.12
EBF4Q9BQW3 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EBF4Q9BQW3 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
EBF4Q9BQW3 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EBF4Q9BQW3 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
EBF4Q9BQW3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EBF4Q9BQW3 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EBF4Q9BQW3 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EBF4Q9BQW3 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.82■□□□□ 0.12
EBF4Q9BQW3 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.82■□□□□ 0.12
EBF4Q9BQW3 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.82■□□□□ 0.12
EBF4Q9BQW3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
EBF4Q9BQW3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EBF4Q9BQW3 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
EBF4Q9BQW3 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
EBF4Q9BQW3 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
EBF4Q9BQW3 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EBF4Q9BQW3 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EBF4Q9BQW3 AC009090.5-201ENST00000624886 2285 ntBASIC15.82■□□□□ 0.12
EBF4Q9BQW3 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EBF4Q9BQW3 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EBF4Q9BQW3 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EBF4Q9BQW3 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.81■□□□□ 0.12
EBF4Q9BQW3 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
EBF4Q9BQW3 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EBF4Q9BQW3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EBF4Q9BQW3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
EBF4Q9BQW3 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
EBF4Q9BQW3 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
EBF4Q9BQW3 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
EBF4Q9BQW3 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EBF4Q9BQW3 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EBF4Q9BQW3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.81■□□□□ 0.12
EBF4Q9BQW3 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EBF4Q9BQW3 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
EBF4Q9BQW3 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.81■□□□□ 0.12
EBF4Q9BQW3 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
EBF4Q9BQW3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EBF4Q9BQW3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.81■□□□□ 0.12
EBF4Q9BQW3 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
EBF4Q9BQW3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EBF4Q9BQW3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.81■□□□□ 0.12
EBF4Q9BQW3 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
EBF4Q9BQW3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.81■□□□□ 0.12
EBF4Q9BQW3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
EBF4Q9BQW3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
EBF4Q9BQW3 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.81■□□□□ 0.12
EBF4Q9BQW3 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
EBF4Q9BQW3 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
EBF4Q9BQW3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.81■□□□□ 0.12
EBF4Q9BQW3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.81■□□□□ 0.12
EBF4Q9BQW3 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.81■□□□□ 0.12
EBF4Q9BQW3 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
EBF4Q9BQW3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.81■□□□□ 0.12
EBF4Q9BQW3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.81■□□□□ 0.12
EBF4Q9BQW3 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.81■□□□□ 0.12
EBF4Q9BQW3 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.81■□□□□ 0.12
EBF4Q9BQW3 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
EBF4Q9BQW3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.81■□□□□ 0.12
EBF4Q9BQW3 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EBF4Q9BQW3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.81■□□□□ 0.12
EBF4Q9BQW3 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.81■□□□□ 0.12
EBF4Q9BQW3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.81■□□□□ 0.12
EBF4Q9BQW3 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.81■□□□□ 0.12
EBF4Q9BQW3 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
EBF4Q9BQW3 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
EBF4Q9BQW3 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms