Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLCC1Q96S66 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLCC1Q96S66 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CLCC1Q96S66 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLCC1Q96S66 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLCC1Q96S66 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.75□□□□□ -0.21
CLCC1Q96S66 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLCC1Q96S66 FRMD8P1-201ENST00000440433 1524 ntBASIC13.74□□□□□ -0.21
CLCC1Q96S66 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CLCC1Q96S66 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CLCC1Q96S66 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CLCC1Q96S66 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CLCC1Q96S66 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLCC1Q96S66 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC13.74□□□□□ -0.21
CLCC1Q96S66 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CLCC1Q96S66 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLCC1Q96S66 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLCC1Q96S66 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC13.74□□□□□ -0.21
CLCC1Q96S66 AL021920.2-201ENST00000624828 1351 ntBASIC13.74□□□□□ -0.21
CLCC1Q96S66 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CLCC1Q96S66 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CLCC1Q96S66 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLCC1Q96S66 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLCC1Q96S66 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLCC1Q96S66 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CLCC1Q96S66 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CLCC1Q96S66 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC13.74□□□□□ -0.21
CLCC1Q96S66 AC106795.1-205ENST00000512851 1056 ntBASIC13.74□□□□□ -0.21
CLCC1Q96S66 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC13.74□□□□□ -0.21
CLCC1Q96S66 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.74□□□□□ -0.21
CLCC1Q96S66 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CLCC1Q96S66 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CLCC1Q96S66 AC064862.7-201ENST00000604520 867 ntBASIC13.74□□□□□ -0.21
CLCC1Q96S66 IFNL4P1-201ENST00000607083 540 ntBASIC13.74□□□□□ -0.21
CLCC1Q96S66 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CLCC1Q96S66 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.74□□□□□ -0.21
CLCC1Q96S66 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC13.74□□□□□ -0.21
CLCC1Q96S66 AC006058.4-201ENST00000624016 1670 ntBASIC13.74□□□□□ -0.21
CLCC1Q96S66 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLCC1Q96S66 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
CLCC1Q96S66 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLCC1Q96S66 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC13.74□□□□□ -0.21
CLCC1Q96S66 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLCC1Q96S66 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CLCC1Q96S66 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLCC1Q96S66 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.74□□□□□ -0.21
CLCC1Q96S66 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLCC1Q96S66 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC13.74□□□□□ -0.21
CLCC1Q96S66 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLCC1Q96S66 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLCC1Q96S66 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLCC1Q96S66 AC073347.1-201ENST00000421633 2643 ntBASIC13.74□□□□□ -0.21
CLCC1Q96S66 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC13.74□□□□□ -0.21
CLCC1Q96S66 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
CLCC1Q96S66 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.73□□□□□ -0.21
CLCC1Q96S66 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLCC1Q96S66 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLCC1Q96S66 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.73□□□□□ -0.21
CLCC1Q96S66 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.73□□□□□ -0.21
CLCC1Q96S66 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLCC1Q96S66 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CLCC1Q96S66 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CLCC1Q96S66 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CLCC1Q96S66 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.73□□□□□ -0.21
CLCC1Q96S66 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CLCC1Q96S66 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLCC1Q96S66 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC13.73□□□□□ -0.21
CLCC1Q96S66 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLCC1Q96S66 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
CLCC1Q96S66 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC13.73□□□□□ -0.21
CLCC1Q96S66 RBM17P3-201ENST00000417687 1192 ntBASIC13.73□□□□□ -0.21
CLCC1Q96S66 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC13.73□□□□□ -0.21
CLCC1Q96S66 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLCC1Q96S66 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CLCC1Q96S66 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLCC1Q96S66 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC13.73□□□□□ -0.21
CLCC1Q96S66 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
CLCC1Q96S66 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CLCC1Q96S66 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CLCC1Q96S66 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC13.73□□□□□ -0.21
CLCC1Q96S66 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC13.73□□□□□ -0.21
CLCC1Q96S66 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLCC1Q96S66 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLCC1Q96S66 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CLCC1Q96S66 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CLCC1Q96S66 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CLCC1Q96S66 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLCC1Q96S66 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLCC1Q96S66 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CLCC1Q96S66 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLCC1Q96S66 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLCC1Q96S66 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CLCC1Q96S66 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLCC1Q96S66 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.73□□□□□ -0.21
CLCC1Q96S66 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CLCC1Q96S66 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CLCC1Q96S66 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.73□□□□□ -0.21
CLCC1Q96S66 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CLCC1Q96S66 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
CLCC1Q96S66 SIGLEC16-201ENST00000599858 1437 ntBASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms