Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.58□□□□□ -0.24
CSMD1Q96PZ7 AC245884.6-201ENST00000515672 1067 ntBASIC13.58□□□□□ -0.24
CSMD1Q96PZ7 AC073352.2-201ENST00000609385 439 ntBASIC13.58□□□□□ -0.24
CSMD1Q96PZ7 AC138951.2-201ENST00000623455 1161 ntBASIC13.58□□□□□ -0.24
CSMD1Q96PZ7 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSMD1Q96PZ7 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSMD1Q96PZ7 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.58□□□□□ -0.24
CSMD1Q96PZ7 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CSMD1Q96PZ7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CSMD1Q96PZ7 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 MTX1P1-201ENST00000440904 838 ntBASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 AP000346.4-201ENST00000614827 381 ntBASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.57□□□□□ -0.24
CSMD1Q96PZ7 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 AC006001.1-201ENST00000325130 474 ntBASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 AC009053.2-201ENST00000563701 2365 ntBASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 Z97205.2-201ENST00000564697 1639 ntBASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 SPTLC1P5-201ENST00000450718 252 ntBASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 PRKXP1-201ENST00000561423 1122 ntBASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CSMD1Q96PZ7 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms