Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
MS4A4EQ96PG1 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 AC103702.1-201ENST00000548801 2630 ntBASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 FOXO1B-201ENST00000504678 1527 ntBASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 AC142381.1-201ENST00000426099 345 ntBASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 HTR5BP-201ENST00000430851 1154 ntBASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 DNAJB3-201ENST00000446806 729 ntBASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 TIMM8BP1-201ENST00000452384 211 ntBASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 AC243562.1-201ENST00000560672 389 ntBASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.13■□□□□ 0.01
MS4A4EQ96PG1 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 SPCS2P4-201ENST00000436160 681 ntBASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 AC079140.1-201ENST00000508039 487 ntBASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 KRT8P48-201ENST00000515599 1220 ntBASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 IGHV3-62-201ENST00000520057 340 ntBASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 AP001282.1-201ENST00000531301 1499 ntBASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MS4A4EQ96PG1 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms