Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.37■□□□□ 0.05
COL21A1Q96P44 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
COL21A1Q96P44 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.37■□□□□ 0.05
COL21A1Q96P44 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
COL21A1Q96P44 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
COL21A1Q96P44 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.37■□□□□ 0.05
COL21A1Q96P44 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
COL21A1Q96P44 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.37■□□□□ 0.05
COL21A1Q96P44 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.37■□□□□ 0.05
COL21A1Q96P44 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.37■□□□□ 0.05
COL21A1Q96P44 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.37■□□□□ 0.05
COL21A1Q96P44 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
COL21A1Q96P44 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.37■□□□□ 0.05
COL21A1Q96P44 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.37■□□□□ 0.05
COL21A1Q96P44 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.37■□□□□ 0.05
COL21A1Q96P44 AC021097.1-201ENST00000607902 574 ntBASIC15.37■□□□□ 0.05
COL21A1Q96P44 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
COL21A1Q96P44 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
COL21A1Q96P44 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
COL21A1Q96P44 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
COL21A1Q96P44 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
COL21A1Q96P44 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
COL21A1Q96P44 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
COL21A1Q96P44 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.37■□□□□ 0.05
COL21A1Q96P44 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
COL21A1Q96P44 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
COL21A1Q96P44 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
COL21A1Q96P44 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
COL21A1Q96P44 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
COL21A1Q96P44 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
COL21A1Q96P44 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.37■□□□□ 0.05
COL21A1Q96P44 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
COL21A1Q96P44 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
COL21A1Q96P44 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
COL21A1Q96P44 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
COL21A1Q96P44 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.37■□□□□ 0.05
COL21A1Q96P44 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
COL21A1Q96P44 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
COL21A1Q96P44 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
COL21A1Q96P44 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
COL21A1Q96P44 DBET-201ENST00000630918 3363 ntBASIC15.36■□□□□ 0.05
COL21A1Q96P44 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
COL21A1Q96P44 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.36■□□□□ 0.05
COL21A1Q96P44 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
COL21A1Q96P44 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
COL21A1Q96P44 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
COL21A1Q96P44 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.36■□□□□ 0.05
COL21A1Q96P44 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.36■□□□□ 0.05
COL21A1Q96P44 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.36■□□□□ 0.05
COL21A1Q96P44 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
COL21A1Q96P44 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
COL21A1Q96P44 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.36■□□□□ 0.05
COL21A1Q96P44 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
COL21A1Q96P44 DNAJB3-201ENST00000446806 729 ntBASIC15.36■□□□□ 0.05
COL21A1Q96P44 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.36■□□□□ 0.05
COL21A1Q96P44 AC112191.1-201ENST00000523689 701 ntBASIC15.36■□□□□ 0.05
COL21A1Q96P44 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
COL21A1Q96P44 AP002472.1-201ENST00000577490 586 ntBASIC15.36■□□□□ 0.05
COL21A1Q96P44 AL009183.1-201ENST00000603760 355 ntBASIC15.36■□□□□ 0.05
COL21A1Q96P44 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.36■□□□□ 0.05
COL21A1Q96P44 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
COL21A1Q96P44 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
COL21A1Q96P44 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
COL21A1Q96P44 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
COL21A1Q96P44 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.36■□□□□ 0.05
COL21A1Q96P44 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
COL21A1Q96P44 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
COL21A1Q96P44 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
COL21A1Q96P44 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.36■□□□□ 0.05
COL21A1Q96P44 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
COL21A1Q96P44 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
COL21A1Q96P44 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
COL21A1Q96P44 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
COL21A1Q96P44 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.36■□□□□ 0.05
COL21A1Q96P44 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
COL21A1Q96P44 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
COL21A1Q96P44 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.36■□□□□ 0.05
COL21A1Q96P44 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
COL21A1Q96P44 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
COL21A1Q96P44 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
COL21A1Q96P44 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
COL21A1Q96P44 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.35■□□□□ 0.05
COL21A1Q96P44 AC092919.2-201ENST00000623631 1645 ntBASIC15.35■□□□□ 0.05
COL21A1Q96P44 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.35■□□□□ 0.05
COL21A1Q96P44 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
COL21A1Q96P44 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
COL21A1Q96P44 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
COL21A1Q96P44 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
COL21A1Q96P44 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
COL21A1Q96P44 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
COL21A1Q96P44 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
COL21A1Q96P44 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
COL21A1Q96P44 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
COL21A1Q96P44 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
COL21A1Q96P44 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
COL21A1Q96P44 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
COL21A1Q96P44 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.35■□□□□ 0.05
COL21A1Q96P44 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
COL21A1Q96P44 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
COL21A1Q96P44 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms