Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
IFT43Q96FT9 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IFT43Q96FT9 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
IFT43Q96FT9 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IFT43Q96FT9 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
IFT43Q96FT9 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.75■□□□□ 0.27
IFT43Q96FT9 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
IFT43Q96FT9 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.75■□□□□ 0.27
IFT43Q96FT9 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
IFT43Q96FT9 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IFT43Q96FT9 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
IFT43Q96FT9 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
IFT43Q96FT9 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
IFT43Q96FT9 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IFT43Q96FT9 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
IFT43Q96FT9 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IFT43Q96FT9 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IFT43Q96FT9 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IFT43Q96FT9 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IFT43Q96FT9 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.75■□□□□ 0.27
IFT43Q96FT9 AC092919.2-201ENST00000623631 1645 ntBASIC16.75■□□□□ 0.27
IFT43Q96FT9 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.75■□□□□ 0.27
IFT43Q96FT9 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
IFT43Q96FT9 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IFT43Q96FT9 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.75■□□□□ 0.27
IFT43Q96FT9 ADH5P3-201ENST00000433842 1137 ntBASIC16.75■□□□□ 0.27
IFT43Q96FT9 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
IFT43Q96FT9 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.75■□□□□ 0.27
IFT43Q96FT9 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.75■□□□□ 0.27
IFT43Q96FT9 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IFT43Q96FT9 AC022145.2-201ENST00000598203 171 ntBASIC16.75■□□□□ 0.27
IFT43Q96FT9 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
IFT43Q96FT9 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IFT43Q96FT9 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
IFT43Q96FT9 LINC01144-201ENST00000626198 1710 ntBASIC16.75■□□□□ 0.27
IFT43Q96FT9 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
IFT43Q96FT9 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IFT43Q96FT9 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
IFT43Q96FT9 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.75■□□□□ 0.27
IFT43Q96FT9 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.75■□□□□ 0.27
IFT43Q96FT9 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.75■□□□□ 0.27
IFT43Q96FT9 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IFT43Q96FT9 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.75■□□□□ 0.27
IFT43Q96FT9 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IFT43Q96FT9 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.75■□□□□ 0.27
IFT43Q96FT9 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
IFT43Q96FT9 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
IFT43Q96FT9 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
IFT43Q96FT9 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.75■□□□□ 0.27
IFT43Q96FT9 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
IFT43Q96FT9 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IFT43Q96FT9 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IFT43Q96FT9 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
IFT43Q96FT9 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFT43Q96FT9 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
IFT43Q96FT9 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
IFT43Q96FT9 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.74■□□□□ 0.27
IFT43Q96FT9 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
IFT43Q96FT9 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFT43Q96FT9 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
IFT43Q96FT9 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
IFT43Q96FT9 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFT43Q96FT9 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
IFT43Q96FT9 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
IFT43Q96FT9 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
IFT43Q96FT9 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFT43Q96FT9 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFT43Q96FT9 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.74■□□□□ 0.27
IFT43Q96FT9 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFT43Q96FT9 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFT43Q96FT9 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.74■□□□□ 0.27
IFT43Q96FT9 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.74■□□□□ 0.27
IFT43Q96FT9 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.74■□□□□ 0.27
IFT43Q96FT9 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
IFT43Q96FT9 HLA-J-203ENST00000494367 1087 ntBASIC16.74■□□□□ 0.27
IFT43Q96FT9 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.74■□□□□ 0.27
IFT43Q96FT9 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
IFT43Q96FT9 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
IFT43Q96FT9 AL161645.1-201ENST00000622716 1255 ntBASIC16.74■□□□□ 0.27
IFT43Q96FT9 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.74■□□□□ 0.27
IFT43Q96FT9 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
IFT43Q96FT9 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFT43Q96FT9 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
IFT43Q96FT9 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
IFT43Q96FT9 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFT43Q96FT9 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.74■□□□□ 0.27
IFT43Q96FT9 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.74■□□□□ 0.27
IFT43Q96FT9 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.74■□□□□ 0.27
IFT43Q96FT9 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFT43Q96FT9 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.74■□□□□ 0.27
IFT43Q96FT9 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFT43Q96FT9 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
IFT43Q96FT9 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IFT43Q96FT9 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IFT43Q96FT9 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.73■□□□□ 0.27
IFT43Q96FT9 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
IFT43Q96FT9 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IFT43Q96FT9 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IFT43Q96FT9 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IFT43Q96FT9 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms