Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CPEB3Q8NE35 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CPEB3Q8NE35 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CPEB3Q8NE35 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.21□□□□□ -0.13
CPEB3Q8NE35 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CPEB3Q8NE35 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CPEB3Q8NE35 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CPEB3Q8NE35 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CPEB3Q8NE35 UXT-AS1-201ENST00000590504 1525 ntBASIC14.21□□□□□ -0.13
CPEB3Q8NE35 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.21□□□□□ -0.13
CPEB3Q8NE35 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CPEB3Q8NE35 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CPEB3Q8NE35 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.21□□□□□ -0.13
CPEB3Q8NE35 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CPEB3Q8NE35 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
CPEB3Q8NE35 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CPEB3Q8NE35 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CPEB3Q8NE35 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CPEB3Q8NE35 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CPEB3Q8NE35 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CPEB3Q8NE35 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CPEB3Q8NE35 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
CPEB3Q8NE35 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.21□□□□□ -0.13
CPEB3Q8NE35 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CPEB3Q8NE35 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.21□□□□□ -0.13
CPEB3Q8NE35 AC004967.1-201ENST00000453589 447 ntBASIC14.21□□□□□ -0.13
CPEB3Q8NE35 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.21□□□□□ -0.13
CPEB3Q8NE35 AC098859.1-201ENST00000502915 1238 ntBASIC14.21□□□□□ -0.13
CPEB3Q8NE35 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.21□□□□□ -0.13
CPEB3Q8NE35 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CPEB3Q8NE35 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.21□□□□□ -0.13
CPEB3Q8NE35 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.21□□□□□ -0.13
CPEB3Q8NE35 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.21□□□□□ -0.13
CPEB3Q8NE35 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.21□□□□□ -0.13
CPEB3Q8NE35 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.21□□□□□ -0.13
CPEB3Q8NE35 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.21□□□□□ -0.13
CPEB3Q8NE35 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.21□□□□□ -0.13
CPEB3Q8NE35 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.21□□□□□ -0.13
CPEB3Q8NE35 AC134684.3-201ENST00000641758 218 ntBASIC14.21□□□□□ -0.13
CPEB3Q8NE35 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.21□□□□□ -0.13
CPEB3Q8NE35 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.21□□□□□ -0.13
CPEB3Q8NE35 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CPEB3Q8NE35 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CPEB3Q8NE35 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CPEB3Q8NE35 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
CPEB3Q8NE35 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
CPEB3Q8NE35 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.21□□□□□ -0.14
CPEB3Q8NE35 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CPEB3Q8NE35 PCDHA1-201ENST00000378133 2726 ntBASIC14.21□□□□□ -0.14
CPEB3Q8NE35 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
CPEB3Q8NE35 LINC02199-201ENST00000506655 2702 ntBASIC14.21□□□□□ -0.14
CPEB3Q8NE35 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
CPEB3Q8NE35 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
CPEB3Q8NE35 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.2□□□□□ -0.14
CPEB3Q8NE35 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.2□□□□□ -0.14
CPEB3Q8NE35 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CPEB3Q8NE35 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CPEB3Q8NE35 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.2□□□□□ -0.14
CPEB3Q8NE35 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CPEB3Q8NE35 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CPEB3Q8NE35 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CPEB3Q8NE35 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.2□□□□□ -0.14
CPEB3Q8NE35 AC103702.1-201ENST00000548801 2630 ntBASIC14.2□□□□□ -0.14
CPEB3Q8NE35 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CPEB3Q8NE35 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.2□□□□□ -0.14
CPEB3Q8NE35 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
CPEB3Q8NE35 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CPEB3Q8NE35 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CPEB3Q8NE35 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CPEB3Q8NE35 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.2□□□□□ -0.14
CPEB3Q8NE35 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CPEB3Q8NE35 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.2□□□□□ -0.14
CPEB3Q8NE35 AC005237.2-201ENST00000434368 219 ntBASIC14.2□□□□□ -0.14
CPEB3Q8NE35 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.2□□□□□ -0.14
CPEB3Q8NE35 AP000344.2-201ENST00000512987 629 ntBASIC14.2□□□□□ -0.14
CPEB3Q8NE35 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CPEB3Q8NE35 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.2□□□□□ -0.14
CPEB3Q8NE35 AC093520.2-201ENST00000561830 333 ntBASIC14.2□□□□□ -0.14
CPEB3Q8NE35 AC139530.3-201ENST00000620344 690 ntBASIC14.2□□□□□ -0.14
CPEB3Q8NE35 AC084121.4-201ENST00000641598 221 ntBASIC14.2□□□□□ -0.14
CPEB3Q8NE35 AF228730.8-201ENST00000642140 221 ntBASIC14.2□□□□□ -0.14
CPEB3Q8NE35 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CPEB3Q8NE35 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CPEB3Q8NE35 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CPEB3Q8NE35 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CPEB3Q8NE35 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.2□□□□□ -0.14
CPEB3Q8NE35 AL513523.2-202ENST00000427283 2040 ntBASIC14.2□□□□□ -0.14
CPEB3Q8NE35 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CPEB3Q8NE35 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CPEB3Q8NE35 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
CPEB3Q8NE35 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CPEB3Q8NE35 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.2□□□□□ -0.14
CPEB3Q8NE35 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms