Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 SLC25A24P2-201ENST00000415059 510 ntBASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 AC026954.1-201ENST00000429771 1293 ntBASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 AL359711.2-201ENST00000563105 872 ntBASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 AL118558.3-201ENST00000607414 1079 ntBASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 AC015967.2-201ENST00000624092 234 ntBASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 AC006435.4-201ENST00000625037 234 ntBASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 AL356737.1-201ENST00000634391 234 ntBASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 AC007969.1-201ENST00000433675 447 ntBASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CFAP43Q8NDM7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC24.84■■□□□ 1.57
CFAP43Q8NDM7 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CFAP43Q8NDM7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC24.84■■□□□ 1.57
CFAP43Q8NDM7 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC24.84■■□□□ 1.57
CFAP43Q8NDM7 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CFAP43Q8NDM7 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CFAP43Q8NDM7 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC24.84■■□□□ 1.57
CFAP43Q8NDM7 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CFAP43Q8NDM7 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC24.84■■□□□ 1.57
CFAP43Q8NDM7 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC24.84■■□□□ 1.57
CFAP43Q8NDM7 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC24.84■■□□□ 1.57
CFAP43Q8NDM7 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC24.84■■□□□ 1.57
CFAP43Q8NDM7 AC097359.3-201ENST00000603982 1210 ntBASIC24.84■■□□□ 1.57
CFAP43Q8NDM7 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC24.84■■□□□ 1.57
CFAP43Q8NDM7 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC24.84■■□□□ 1.57
CFAP43Q8NDM7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC24.84■■□□□ 1.57
CFAP43Q8NDM7 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
CFAP43Q8NDM7 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC24.83■■□□□ 1.57
CFAP43Q8NDM7 AC012313.1-201ENST00000593393 3059 ntBASIC24.83■■□□□ 1.57
CFAP43Q8NDM7 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC24.83■■□□□ 1.57
CFAP43Q8NDM7 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
CFAP43Q8NDM7 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC24.83■■□□□ 1.57
CFAP43Q8NDM7 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CFAP43Q8NDM7 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC24.83■■□□□ 1.57
CFAP43Q8NDM7 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CFAP43Q8NDM7 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
CFAP43Q8NDM7 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
CFAP43Q8NDM7 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC24.83■■□□□ 1.57
CFAP43Q8NDM7 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
CFAP43Q8NDM7 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC24.83■■□□□ 1.57
CFAP43Q8NDM7 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CFAP43Q8NDM7 AC091804.1-201ENST00000486888 567 ntBASIC24.83■■□□□ 1.57
CFAP43Q8NDM7 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
CFAP43Q8NDM7 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC24.83■■□□□ 1.57
CFAP43Q8NDM7 ACTG1P17-201ENST00000558391 1119 ntBASIC24.83■■□□□ 1.57
CFAP43Q8NDM7 KC6-205ENST00000599934 556 ntTSL 4 BASIC24.83■■□□□ 1.57
CFAP43Q8NDM7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC24.83■■□□□ 1.57
CFAP43Q8NDM7 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
CFAP43Q8NDM7 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC24.83■■□□□ 1.57
CFAP43Q8NDM7 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC24.83■■□□□ 1.57
CFAP43Q8NDM7 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CFAP43Q8NDM7 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CFAP43Q8NDM7 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CFAP43Q8NDM7 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CFAP43Q8NDM7 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC24.83■■□□□ 1.57
CFAP43Q8NDM7 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.56
CFAP43Q8NDM7 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
CFAP43Q8NDM7 HARS-202ENST00000415192 1401 ntTSL 2 BASIC24.82■■□□□ 1.56
CFAP43Q8NDM7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC24.82■■□□□ 1.56
CFAP43Q8NDM7 VILL-207ENST00000465644 1857 ntTSL 5 BASIC24.82■■□□□ 1.56
CFAP43Q8NDM7 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CFAP43Q8NDM7 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC24.82■■□□□ 1.56
CFAP43Q8NDM7 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CFAP43Q8NDM7 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CFAP43Q8NDM7 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms