Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TTC9CQ8N5M4 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC12.86□□□□□ -0.35
TTC9CQ8N5M4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TTC9CQ8N5M4 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
TTC9CQ8N5M4 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TTC9CQ8N5M4 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TTC9CQ8N5M4 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TTC9CQ8N5M4 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TTC9CQ8N5M4 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TTC9CQ8N5M4 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC12.85□□□□□ -0.35
TTC9CQ8N5M4 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC12.85□□□□□ -0.35
TTC9CQ8N5M4 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TTC9CQ8N5M4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TTC9CQ8N5M4 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC12.85□□□□□ -0.35
TTC9CQ8N5M4 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
TTC9CQ8N5M4 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TTC9CQ8N5M4 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TTC9CQ8N5M4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TTC9CQ8N5M4 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC12.85□□□□□ -0.35
TTC9CQ8N5M4 TFAMP1-201ENST00000412727 736 ntBASIC12.85□□□□□ -0.35
TTC9CQ8N5M4 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC12.85□□□□□ -0.35
TTC9CQ8N5M4 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC12.85□□□□□ -0.35
TTC9CQ8N5M4 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC12.85□□□□□ -0.35
TTC9CQ8N5M4 FAM58CP-201ENST00000435741 640 ntBASIC12.85□□□□□ -0.35
TTC9CQ8N5M4 ACTG1P14-201ENST00000446382 1122 ntBASIC12.85□□□□□ -0.35
TTC9CQ8N5M4 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC12.85□□□□□ -0.35
TTC9CQ8N5M4 POLD2P1-201ENST00000511220 997 ntBASIC12.85□□□□□ -0.35
TTC9CQ8N5M4 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC12.85□□□□□ -0.35
TTC9CQ8N5M4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TTC9CQ8N5M4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TTC9CQ8N5M4 AC073389.1-201ENST00000595595 795 ntBASIC12.85□□□□□ -0.35
TTC9CQ8N5M4 MTDHP5-201ENST00000598980 586 ntBASIC12.85□□□□□ -0.35
TTC9CQ8N5M4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TTC9CQ8N5M4 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TTC9CQ8N5M4 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TTC9CQ8N5M4 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
TTC9CQ8N5M4 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TTC9CQ8N5M4 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TTC9CQ8N5M4 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC12.85□□□□□ -0.35
TTC9CQ8N5M4 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
TTC9CQ8N5M4 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
TTC9CQ8N5M4 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TTC9CQ8N5M4 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TTC9CQ8N5M4 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TTC9CQ8N5M4 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC12.85□□□□□ -0.35
TTC9CQ8N5M4 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
TTC9CQ8N5M4 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
TTC9CQ8N5M4 AL603832.2-201ENST00000566195 2125 ntBASIC12.85□□□□□ -0.35
TTC9CQ8N5M4 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC12.85□□□□□ -0.35
TTC9CQ8N5M4 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 NARF-206ENST00000457415 1668 ntTSL 5 BASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 AL355306.1-201ENST00000415580 579 ntBASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 AC245100.5-201ENST00000452108 331 ntBASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 RN7SL589P-201ENST00000481268 310 ntBASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 AC105233.2-201ENST00000523697 349 ntBASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 AF228730.5-201ENST00000530288 346 ntBASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 AL135744.1-201ENST00000565098 629 ntBASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 C20orf181-201ENST00000623918 480 ntBASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 AC092902.6-201ENST00000641783 218 ntBASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 AL365203.3-201ENST00000609742 2057 ntBASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TTC9CQ8N5M4 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms