Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC21.97■■□□□ 1.11
XRN1Q8IZH2 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC21.97■■□□□ 1.11
XRN1Q8IZH2 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC21.96■■□□□ 1.11
XRN1Q8IZH2 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC21.96■■□□□ 1.11
XRN1Q8IZH2 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC21.96■■□□□ 1.11
XRN1Q8IZH2 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
XRN1Q8IZH2 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC21.96■■□□□ 1.11
XRN1Q8IZH2 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
XRN1Q8IZH2 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
XRN1Q8IZH2 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
XRN1Q8IZH2 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
XRN1Q8IZH2 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC21.96■■□□□ 1.11
XRN1Q8IZH2 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC21.96■■□□□ 1.11
XRN1Q8IZH2 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
XRN1Q8IZH2 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
XRN1Q8IZH2 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
XRN1Q8IZH2 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
XRN1Q8IZH2 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
XRN1Q8IZH2 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
XRN1Q8IZH2 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
XRN1Q8IZH2 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
XRN1Q8IZH2 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
XRN1Q8IZH2 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
XRN1Q8IZH2 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
XRN1Q8IZH2 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
XRN1Q8IZH2 HINT2P1-201ENST00000419438 481 ntBASIC21.95■■□□□ 1.1
XRN1Q8IZH2 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC21.95■■□□□ 1.1
XRN1Q8IZH2 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC21.95■■□□□ 1.1
XRN1Q8IZH2 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
XRN1Q8IZH2 AP003171.2-201ENST00000528208 925 ntBASIC21.95■■□□□ 1.1
XRN1Q8IZH2 AC097724.1-201ENST00000609581 426 ntBASIC21.95■■□□□ 1.1
XRN1Q8IZH2 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC21.95■■□□□ 1.1
XRN1Q8IZH2 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
XRN1Q8IZH2 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
XRN1Q8IZH2 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC21.95■■□□□ 1.1
XRN1Q8IZH2 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
XRN1Q8IZH2 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
XRN1Q8IZH2 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
XRN1Q8IZH2 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC21.95■■□□□ 1.1
XRN1Q8IZH2 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC21.95■■□□□ 1.1
XRN1Q8IZH2 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC21.95■■□□□ 1.1
XRN1Q8IZH2 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
XRN1Q8IZH2 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
XRN1Q8IZH2 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
XRN1Q8IZH2 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
XRN1Q8IZH2 NUS1P3-201ENST00000423502 862 ntBASIC21.94■■□□□ 1.1
XRN1Q8IZH2 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC21.94■■□□□ 1.1
XRN1Q8IZH2 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC21.94■■□□□ 1.1
XRN1Q8IZH2 AP005019.2-201ENST00000615104 511 ntBASIC21.94■■□□□ 1.1
XRN1Q8IZH2 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
XRN1Q8IZH2 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
XRN1Q8IZH2 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
XRN1Q8IZH2 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
XRN1Q8IZH2 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC21.94■■□□□ 1.1
XRN1Q8IZH2 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
XRN1Q8IZH2 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
XRN1Q8IZH2 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
XRN1Q8IZH2 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC21.94■■□□□ 1.1
XRN1Q8IZH2 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
XRN1Q8IZH2 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
XRN1Q8IZH2 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC21.94■■□□□ 1.1
XRN1Q8IZH2 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC21.94■■□□□ 1.1
XRN1Q8IZH2 AL451050.2-201ENST00000606967 682 ntBASIC21.94■■□□□ 1.1
XRN1Q8IZH2 RNF216P1-203ENST00000404404 2427 ntBASIC21.94■■□□□ 1.1
XRN1Q8IZH2 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
XRN1Q8IZH2 TK1-203ENST00000588734 1681 ntTSL 2 BASIC21.94■■□□□ 1.1
XRN1Q8IZH2 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
XRN1Q8IZH2 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC21.93■■□□□ 1.1
XRN1Q8IZH2 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC21.93■■□□□ 1.1
XRN1Q8IZH2 AL023775.1-201ENST00000454907 1746 ntBASIC21.93■■□□□ 1.1
XRN1Q8IZH2 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
XRN1Q8IZH2 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
XRN1Q8IZH2 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC21.93■■□□□ 1.1
XRN1Q8IZH2 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
XRN1Q8IZH2 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
XRN1Q8IZH2 AC015818.8-201ENST00000587907 1519 ntBASIC21.93■■□□□ 1.1
XRN1Q8IZH2 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC21.93■■□□□ 1.1
XRN1Q8IZH2 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
XRN1Q8IZH2 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
XRN1Q8IZH2 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC21.93■■□□□ 1.1
XRN1Q8IZH2 SDCCAG3P2-201ENST00000326105 1023 ntBASIC21.93■■□□□ 1.1
XRN1Q8IZH2 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
XRN1Q8IZH2 GGCT-203ENST00000409144 836 ntTSL 2 BASIC21.93■■□□□ 1.1
XRN1Q8IZH2 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC21.93■■□□□ 1.1
XRN1Q8IZH2 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC21.93■■□□□ 1.1
XRN1Q8IZH2 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
XRN1Q8IZH2 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC21.93■■□□□ 1.1
XRN1Q8IZH2 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
XRN1Q8IZH2 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
XRN1Q8IZH2 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC21.93■■□□□ 1.1
XRN1Q8IZH2 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC21.93■■□□□ 1.1
XRN1Q8IZH2 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC21.93■■□□□ 1.1
XRN1Q8IZH2 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
XRN1Q8IZH2 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
XRN1Q8IZH2 NDUFV2P1-201ENST00000596415 907 ntBASIC21.93■■□□□ 1.1
XRN1Q8IZH2 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC21.93■■□□□ 1.1
XRN1Q8IZH2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
XRN1Q8IZH2 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC21.93■■□□□ 1.1
XRN1Q8IZH2 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC21.93■■□□□ 1.1
XRN1Q8IZH2 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms