Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
TMEFF1Q8IYR6 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
TMEFF1Q8IYR6 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TMEFF1Q8IYR6 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TMEFF1Q8IYR6 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEFF1Q8IYR6 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEFF1Q8IYR6 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.01■□□□□ 0.15
TMEFF1Q8IYR6 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.01■□□□□ 0.15
TMEFF1Q8IYR6 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.01■□□□□ 0.15
TMEFF1Q8IYR6 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TMEFF1Q8IYR6 CYP4F24P-201ENST00000586049 1580 ntBASIC16.01■□□□□ 0.15
TMEFF1Q8IYR6 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TMEFF1Q8IYR6 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEFF1Q8IYR6 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TMEFF1Q8IYR6 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEFF1Q8IYR6 AC105020.1-201ENST00000435356 2205 ntBASIC16.01■□□□□ 0.15
TMEFF1Q8IYR6 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEFF1Q8IYR6 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.01■□□□□ 0.15
TMEFF1Q8IYR6 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEFF1Q8IYR6 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEFF1Q8IYR6 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEFF1Q8IYR6 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.01■□□□□ 0.15
TMEFF1Q8IYR6 FO393414.2-201ENST00000405153 598 ntBASIC16.01■□□□□ 0.15
TMEFF1Q8IYR6 HIST3H2BA-201ENST00000436555 524 ntBASIC16.01■□□□□ 0.15
TMEFF1Q8IYR6 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.01■□□□□ 0.15
TMEFF1Q8IYR6 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.01■□□□□ 0.15
TMEFF1Q8IYR6 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.01■□□□□ 0.15
TMEFF1Q8IYR6 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.01■□□□□ 0.15
TMEFF1Q8IYR6 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.01■□□□□ 0.15
TMEFF1Q8IYR6 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.01■□□□□ 0.15
TMEFF1Q8IYR6 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TMEFF1Q8IYR6 AC005622.1-201ENST00000636801 1703 ntBASIC16.01■□□□□ 0.15
TMEFF1Q8IYR6 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEFF1Q8IYR6 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TMEFF1Q8IYR6 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TMEFF1Q8IYR6 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TMEFF1Q8IYR6 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TMEFF1Q8IYR6 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TMEFF1Q8IYR6 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEFF1Q8IYR6 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEFF1Q8IYR6 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.01■□□□□ 0.15
TMEFF1Q8IYR6 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TMEFF1Q8IYR6 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEFF1Q8IYR6 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 PCGF3-213ENST00000620529 1899 ntBASIC16■□□□□ 0.15
TMEFF1Q8IYR6 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 BOLA2P3-201ENST00000404566 256 ntBASIC16■□□□□ 0.15
TMEFF1Q8IYR6 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 KRT43P-201ENST00000434019 910 ntBASIC16■□□□□ 0.15
TMEFF1Q8IYR6 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 MIR4538-201ENST00000581377 78 ntBASIC16■□□□□ 0.15
TMEFF1Q8IYR6 AL606495.2-201ENST00000605867 535 ntBASIC16■□□□□ 0.15
TMEFF1Q8IYR6 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 AC106886.4-201ENST00000623557 2502 ntBASIC16■□□□□ 0.15
TMEFF1Q8IYR6 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEFF1Q8IYR6 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TMEFF1Q8IYR6 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms