Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD2Q8IV50 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
LYSMD2Q8IV50 AC105250.1-201ENST00000509378 2057 ntBASIC14.28□□□□□ -0.12
LYSMD2Q8IV50 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC14.28□□□□□ -0.12
LYSMD2Q8IV50 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD2Q8IV50 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD2Q8IV50 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.28□□□□□ -0.12
LYSMD2Q8IV50 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.28□□□□□ -0.12
LYSMD2Q8IV50 AC092127.1-201ENST00000567093 3455 ntBASIC14.28□□□□□ -0.12
LYSMD2Q8IV50 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.28□□□□□ -0.12
LYSMD2Q8IV50 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD2Q8IV50 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD2Q8IV50 MIR4497-201ENST00000583208 89 ntBASIC14.28□□□□□ -0.12
LYSMD2Q8IV50 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD2Q8IV50 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD2Q8IV50 AL353801.3-201ENST00000609898 542 ntBASIC14.28□□□□□ -0.12
LYSMD2Q8IV50 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
LYSMD2Q8IV50 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.28□□□□□ -0.12
LYSMD2Q8IV50 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.28□□□□□ -0.12
LYSMD2Q8IV50 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD2Q8IV50 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD2Q8IV50 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD2Q8IV50 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD2Q8IV50 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD2Q8IV50 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
LYSMD2Q8IV50 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.28□□□□□ -0.12
LYSMD2Q8IV50 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD2Q8IV50 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD2Q8IV50 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD2Q8IV50 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.28□□□□□ -0.12
LYSMD2Q8IV50 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD2Q8IV50 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.28□□□□□ -0.12
LYSMD2Q8IV50 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD2Q8IV50 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LYSMD2Q8IV50 CICP17-201ENST00000418553 2377 ntBASIC14.27□□□□□ -0.12
LYSMD2Q8IV50 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
LYSMD2Q8IV50 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
LYSMD2Q8IV50 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LYSMD2Q8IV50 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
LYSMD2Q8IV50 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
LYSMD2Q8IV50 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
LYSMD2Q8IV50 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LYSMD2Q8IV50 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
LYSMD2Q8IV50 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
LYSMD2Q8IV50 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LYSMD2Q8IV50 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.27□□□□□ -0.12
LYSMD2Q8IV50 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LYSMD2Q8IV50 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
LYSMD2Q8IV50 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
LYSMD2Q8IV50 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
LYSMD2Q8IV50 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LYSMD2Q8IV50 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.27□□□□□ -0.12
LYSMD2Q8IV50 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.27□□□□□ -0.12
LYSMD2Q8IV50 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC14.27□□□□□ -0.13
LYSMD2Q8IV50 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LYSMD2Q8IV50 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC14.27□□□□□ -0.13
LYSMD2Q8IV50 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LYSMD2Q8IV50 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC14.27□□□□□ -0.13
LYSMD2Q8IV50 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.27□□□□□ -0.13
LYSMD2Q8IV50 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LYSMD2Q8IV50 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.27□□□□□ -0.13
LYSMD2Q8IV50 AC005336.2-201ENST00000593183 939 ntBASIC14.27□□□□□ -0.13
LYSMD2Q8IV50 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.27□□□□□ -0.13
LYSMD2Q8IV50 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC14.27□□□□□ -0.13
LYSMD2Q8IV50 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.27□□□□□ -0.13
LYSMD2Q8IV50 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LYSMD2Q8IV50 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
LYSMD2Q8IV50 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
LYSMD2Q8IV50 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LYSMD2Q8IV50 AL161772.1-201ENST00000610494 4412 ntBASIC14.27□□□□□ -0.13
LYSMD2Q8IV50 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.27□□□□□ -0.13
LYSMD2Q8IV50 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LYSMD2Q8IV50 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LYSMD2Q8IV50 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD2Q8IV50 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD2Q8IV50 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
LYSMD2Q8IV50 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.26□□□□□ -0.13
LYSMD2Q8IV50 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD2Q8IV50 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
LYSMD2Q8IV50 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD2Q8IV50 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD2Q8IV50 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.26□□□□□ -0.13
LYSMD2Q8IV50 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD2Q8IV50 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD2Q8IV50 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.26□□□□□ -0.13
LYSMD2Q8IV50 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.26□□□□□ -0.13
LYSMD2Q8IV50 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD2Q8IV50 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD2Q8IV50 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.26□□□□□ -0.13
LYSMD2Q8IV50 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
LYSMD2Q8IV50 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
LYSMD2Q8IV50 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD2Q8IV50 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD2Q8IV50 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.26□□□□□ -0.13
LYSMD2Q8IV50 RN7SL606P-201ENST00000472779 293 ntBASIC14.26□□□□□ -0.13
LYSMD2Q8IV50 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.26□□□□□ -0.13
LYSMD2Q8IV50 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC14.26□□□□□ -0.13
LYSMD2Q8IV50 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.26□□□□□ -0.13
LYSMD2Q8IV50 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.26□□□□□ -0.13
LYSMD2Q8IV50 DUT-205ENST00000558813 769 ntTSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms