Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 C8orf49-201ENST00000525043 1968 ntBASIC13.54□□□□□ -0.24
ZNF546Q86UE3 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ZNF546Q86UE3 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.53□□□□□ -0.24
ZNF546Q86UE3 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 STARP1-201ENST00000397973 869 ntBASIC13.53□□□□□ -0.24
ZNF546Q86UE3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC13.53□□□□□ -0.24
ZNF546Q86UE3 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 AC005332.3-201ENST00000589904 676 ntBASIC13.53□□□□□ -0.24
ZNF546Q86UE3 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
ZNF546Q86UE3 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
ZNF546Q86UE3 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
ZNF546Q86UE3 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.52□□□□□ -0.24
ZNF546Q86UE3 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ZNF546Q86UE3 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.52□□□□□ -0.24
ZNF546Q86UE3 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
ZNF546Q86UE3 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ZNF546Q86UE3 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.52□□□□□ -0.24
ZNF546Q86UE3 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
ZNF546Q86UE3 AC138969.2-201ENST00000532739 9932 ntBASIC13.52□□□□□ -0.24
ZNF546Q86UE3 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.52□□□□□ -0.24
ZNF546Q86UE3 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.52□□□□□ -0.24
ZNF546Q86UE3 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ZNF546Q86UE3 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
ZNF546Q86UE3 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF546Q86UE3 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF546Q86UE3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ZNF546Q86UE3 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms