Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CCDC141Q6ZP82 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCDC141Q6ZP82 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCDC141Q6ZP82 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC23.73■■□□□ 1.39
CCDC141Q6ZP82 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CCDC141Q6ZP82 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCDC141Q6ZP82 ZBTB12BP-201ENST00000314232 1122 ntBASIC23.73■■□□□ 1.39
CCDC141Q6ZP82 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
CCDC141Q6ZP82 BRWD1P1-201ENST00000401091 371 ntBASIC23.73■■□□□ 1.39
CCDC141Q6ZP82 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CCDC141Q6ZP82 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CCDC141Q6ZP82 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC23.73■■□□□ 1.39
CCDC141Q6ZP82 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC23.73■■□□□ 1.39
CCDC141Q6ZP82 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC23.73■■□□□ 1.39
CCDC141Q6ZP82 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC23.73■■□□□ 1.39
CCDC141Q6ZP82 AC244093.1-201ENST00000610837 814 ntBASIC23.73■■□□□ 1.39
CCDC141Q6ZP82 AIRN-201ENST00000601203 4374 ntBASIC23.73■■□□□ 1.39
CCDC141Q6ZP82 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CCDC141Q6ZP82 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC23.73■■□□□ 1.39
CCDC141Q6ZP82 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCDC141Q6ZP82 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC23.73■■□□□ 1.39
CCDC141Q6ZP82 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCDC141Q6ZP82 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CCDC141Q6ZP82 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CCDC141Q6ZP82 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CCDC141Q6ZP82 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC23.72■■□□□ 1.39
CCDC141Q6ZP82 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CCDC141Q6ZP82 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC23.72■■□□□ 1.39
CCDC141Q6ZP82 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC23.72■■□□□ 1.39
CCDC141Q6ZP82 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CCDC141Q6ZP82 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CCDC141Q6ZP82 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
CCDC141Q6ZP82 CNN2P8-201ENST00000421872 913 ntBASIC23.72■■□□□ 1.39
CCDC141Q6ZP82 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CCDC141Q6ZP82 GAPDHP40-201ENST00000505218 1006 ntBASIC23.72■■□□□ 1.39
CCDC141Q6ZP82 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC23.72■■□□□ 1.39
CCDC141Q6ZP82 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC23.72■■□□□ 1.39
CCDC141Q6ZP82 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC23.72■■□□□ 1.39
CCDC141Q6ZP82 LOX-206ENST00000639739 1626 ntTSL 5 BASIC23.72■■□□□ 1.39
CCDC141Q6ZP82 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC23.72■■□□□ 1.39
CCDC141Q6ZP82 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC23.72■■□□□ 1.39
CCDC141Q6ZP82 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
CCDC141Q6ZP82 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CCDC141Q6ZP82 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CCDC141Q6ZP82 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CCDC141Q6ZP82 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
CCDC141Q6ZP82 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
CCDC141Q6ZP82 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CCDC141Q6ZP82 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC23.71■■□□□ 1.39
CCDC141Q6ZP82 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC23.71■■□□□ 1.39
CCDC141Q6ZP82 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CCDC141Q6ZP82 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CCDC141Q6ZP82 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CCDC141Q6ZP82 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CCDC141Q6ZP82 AGER-214ENST00000538695 487 ntTSL 2 BASIC23.71■■□□□ 1.39
CCDC141Q6ZP82 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC23.71■■□□□ 1.39
CCDC141Q6ZP82 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CCDC141Q6ZP82 AC008687.7-202ENST00000637404 953 ntBASIC23.71■■□□□ 1.39
CCDC141Q6ZP82 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CCDC141Q6ZP82 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC23.71■■□□□ 1.39
CCDC141Q6ZP82 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC23.71■■□□□ 1.39
CCDC141Q6ZP82 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC23.71■■□□□ 1.39
CCDC141Q6ZP82 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CCDC141Q6ZP82 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CCDC141Q6ZP82 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CCDC141Q6ZP82 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CCDC141Q6ZP82 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC23.71■■□□□ 1.39
CCDC141Q6ZP82 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CCDC141Q6ZP82 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
CCDC141Q6ZP82 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC23.7■■□□□ 1.38
CCDC141Q6ZP82 MIR1247-201ENST00000408206 136 ntBASIC23.7■■□□□ 1.38
CCDC141Q6ZP82 RPL8-205ENST00000527914 551 ntTSL 3 BASIC23.7■■□□□ 1.38
CCDC141Q6ZP82 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC23.7■■□□□ 1.38
CCDC141Q6ZP82 EMC4-209ENST00000559421 497 ntTSL 2 BASIC23.7■■□□□ 1.38
CCDC141Q6ZP82 AC025279.2-201ENST00000569730 653 ntBASIC23.7■■□□□ 1.38
CCDC141Q6ZP82 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
CCDC141Q6ZP82 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC23.7■■□□□ 1.38
CCDC141Q6ZP82 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC23.7■■□□□ 1.38
CCDC141Q6ZP82 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
CCDC141Q6ZP82 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CCDC141Q6ZP82 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
CCDC141Q6ZP82 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC23.7■■□□□ 1.38
CCDC141Q6ZP82 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC23.7■■□□□ 1.38
CCDC141Q6ZP82 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CCDC141Q6ZP82 AC006449.6-201ENST00000612330 2296 ntBASIC23.7■■□□□ 1.38
CCDC141Q6ZP82 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CCDC141Q6ZP82 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC23.7■■□□□ 1.38
CCDC141Q6ZP82 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC23.7■■□□□ 1.38
CCDC141Q6ZP82 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC23.7■■□□□ 1.38
CCDC141Q6ZP82 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CCDC141Q6ZP82 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CCDC141Q6ZP82 AC092171.3-201ENST00000610122 2651 ntBASIC23.69■■□□□ 1.38
CCDC141Q6ZP82 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC141Q6ZP82 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC141Q6ZP82 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC23.69■■□□□ 1.38
CCDC141Q6ZP82 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC23.69■■□□□ 1.38
CCDC141Q6ZP82 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC23.69■■□□□ 1.38
CCDC141Q6ZP82 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC23.69■■□□□ 1.38
CCDC141Q6ZP82 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC23.69■■□□□ 1.38
CCDC141Q6ZP82 RPL13AP20-201ENST00000459725 609 ntBASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms