Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.92■□□□□ 0.3
RFWD3Q6PCD5 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFWD3Q6PCD5 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RFWD3Q6PCD5 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFWD3Q6PCD5 DBET-201ENST00000630918 3363 ntBASIC16.92■□□□□ 0.3
RFWD3Q6PCD5 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RFWD3Q6PCD5 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
RFWD3Q6PCD5 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFWD3Q6PCD5 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFWD3Q6PCD5 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RFWD3Q6PCD5 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFWD3Q6PCD5 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.92■□□□□ 0.3
RFWD3Q6PCD5 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RFWD3Q6PCD5 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.92■□□□□ 0.3
RFWD3Q6PCD5 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.92■□□□□ 0.3
RFWD3Q6PCD5 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RFWD3Q6PCD5 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.92■□□□□ 0.3
RFWD3Q6PCD5 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RFWD3Q6PCD5 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.92■□□□□ 0.3
RFWD3Q6PCD5 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.92■□□□□ 0.3
RFWD3Q6PCD5 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RFWD3Q6PCD5 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.92■□□□□ 0.3
RFWD3Q6PCD5 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RFWD3Q6PCD5 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFWD3Q6PCD5 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RFWD3Q6PCD5 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFWD3Q6PCD5 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.92■□□□□ 0.3
RFWD3Q6PCD5 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFWD3Q6PCD5 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RFWD3Q6PCD5 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RFWD3Q6PCD5 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RFWD3Q6PCD5 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.92■□□□□ 0.3
RFWD3Q6PCD5 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFWD3Q6PCD5 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFWD3Q6PCD5 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFWD3Q6PCD5 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFWD3Q6PCD5 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFWD3Q6PCD5 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFWD3Q6PCD5 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFWD3Q6PCD5 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFWD3Q6PCD5 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.91■□□□□ 0.3
RFWD3Q6PCD5 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFWD3Q6PCD5 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.91■□□□□ 0.3
RFWD3Q6PCD5 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.91■□□□□ 0.3
RFWD3Q6PCD5 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RFWD3Q6PCD5 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
RFWD3Q6PCD5 AC005622.1-201ENST00000636801 1703 ntBASIC16.91■□□□□ 0.3
RFWD3Q6PCD5 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.91■□□□□ 0.3
RFWD3Q6PCD5 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFWD3Q6PCD5 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.91■□□□□ 0.3
RFWD3Q6PCD5 SPDYE7P-202ENST00000420373 878 ntBASIC16.91■□□□□ 0.3
RFWD3Q6PCD5 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.91■□□□□ 0.3
RFWD3Q6PCD5 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.91■□□□□ 0.3
RFWD3Q6PCD5 AC098859.1-201ENST00000502915 1238 ntBASIC16.91■□□□□ 0.3
RFWD3Q6PCD5 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.91■□□□□ 0.3
RFWD3Q6PCD5 AC051619.7-201ENST00000568314 623 ntBASIC16.91■□□□□ 0.3
RFWD3Q6PCD5 AC015911.4-201ENST00000588022 1070 ntBASIC16.91■□□□□ 0.3
RFWD3Q6PCD5 AC003101.2-201ENST00000612557 442 ntBASIC16.91■□□□□ 0.3
RFWD3Q6PCD5 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.91■□□□□ 0.3
RFWD3Q6PCD5 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.91■□□□□ 0.3
RFWD3Q6PCD5 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFWD3Q6PCD5 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RFWD3Q6PCD5 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFWD3Q6PCD5 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFWD3Q6PCD5 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.91■□□□□ 0.3
RFWD3Q6PCD5 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFWD3Q6PCD5 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFWD3Q6PCD5 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFWD3Q6PCD5 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
RFWD3Q6PCD5 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFWD3Q6PCD5 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RFWD3Q6PCD5 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 HLA-H-201ENST00000383620 1096 ntBASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 KLF2P3-201ENST00000451977 1087 ntBASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 AC125807.1-201ENST00000483097 614 ntBASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 RNA5SP410-201ENST00000516285 106 ntBASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.9■□□□□ 0.3
RFWD3Q6PCD5 AC018529.1-201ENST00000613063 361 ntBASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms