Protein–RNA interactions for Protein: Q68CJ9

CREB3L3, Cyclic AMP-responsive element-binding protein 3-like protein 3, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3L3Q68CJ9 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CREB3L3Q68CJ9 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CREB3L3Q68CJ9 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC19.24■□□□□ 0.67
CREB3L3Q68CJ9 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.24■□□□□ 0.67
CREB3L3Q68CJ9 AL691432.1-201ENST00000596308 1422 ntBASIC19.24■□□□□ 0.67
CREB3L3Q68CJ9 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CREB3L3Q68CJ9 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CREB3L3Q68CJ9 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CREB3L3Q68CJ9 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CREB3L3Q68CJ9 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CREB3L3Q68CJ9 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CREB3L3Q68CJ9 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC19.23■□□□□ 0.67
CREB3L3Q68CJ9 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC19.23■□□□□ 0.67
CREB3L3Q68CJ9 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CREB3L3Q68CJ9 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CREB3L3Q68CJ9 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CREB3L3Q68CJ9 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CREB3L3Q68CJ9 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CREB3L3Q68CJ9 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CREB3L3Q68CJ9 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CREB3L3Q68CJ9 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CREB3L3Q68CJ9 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.23■□□□□ 0.67
CREB3L3Q68CJ9 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CREB3L3Q68CJ9 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.23■□□□□ 0.67
CREB3L3Q68CJ9 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC19.23■□□□□ 0.67
CREB3L3Q68CJ9 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC19.23■□□□□ 0.67
CREB3L3Q68CJ9 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.23■□□□□ 0.67
CREB3L3Q68CJ9 MIR3687-2-201ENST00000577708 61 ntBASIC19.23■□□□□ 0.67
CREB3L3Q68CJ9 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.23■□□□□ 0.67
CREB3L3Q68CJ9 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.23■□□□□ 0.67
CREB3L3Q68CJ9 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.23■□□□□ 0.67
CREB3L3Q68CJ9 MIR3687-1-201ENST00000614492 61 ntBASIC19.23■□□□□ 0.67
CREB3L3Q68CJ9 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CREB3L3Q68CJ9 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CREB3L3Q68CJ9 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CREB3L3Q68CJ9 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CREB3L3Q68CJ9 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CREB3L3Q68CJ9 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CREB3L3Q68CJ9 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CREB3L3Q68CJ9 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CREB3L3Q68CJ9 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CREB3L3Q68CJ9 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CREB3L3Q68CJ9 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CREB3L3Q68CJ9 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CREB3L3Q68CJ9 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CREB3L3Q68CJ9 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CREB3L3Q68CJ9 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CREB3L3Q68CJ9 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CREB3L3Q68CJ9 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CREB3L3Q68CJ9 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CREB3L3Q68CJ9 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CREB3L3Q68CJ9 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.22■□□□□ 0.67
CREB3L3Q68CJ9 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CREB3L3Q68CJ9 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
CREB3L3Q68CJ9 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
CREB3L3Q68CJ9 AC005237.2-201ENST00000434368 219 ntBASIC19.22■□□□□ 0.67
CREB3L3Q68CJ9 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.22■□□□□ 0.67
CREB3L3Q68CJ9 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.22■□□□□ 0.67
CREB3L3Q68CJ9 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.22■□□□□ 0.67
CREB3L3Q68CJ9 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CREB3L3Q68CJ9 WARS-232ENST00000556645 2508 ntTSL 5 BASIC19.22■□□□□ 0.67
CREB3L3Q68CJ9 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CREB3L3Q68CJ9 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CREB3L3Q68CJ9 AL136982.4-201ENST00000437689 1740 ntBASIC19.22■□□□□ 0.67
CREB3L3Q68CJ9 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CREB3L3Q68CJ9 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CREB3L3Q68CJ9 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CREB3L3Q68CJ9 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CREB3L3Q68CJ9 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CREB3L3Q68CJ9 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CREB3L3Q68CJ9 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CREB3L3Q68CJ9 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC19.22■□□□□ 0.67
CREB3L3Q68CJ9 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CREB3L3Q68CJ9 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CREB3L3Q68CJ9 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CREB3L3Q68CJ9 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CREB3L3Q68CJ9 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CREB3L3Q68CJ9 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CREB3L3Q68CJ9 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CREB3L3Q68CJ9 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC19.21■□□□□ 0.67
CREB3L3Q68CJ9 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC19.21■□□□□ 0.67
CREB3L3Q68CJ9 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CREB3L3Q68CJ9 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CREB3L3Q68CJ9 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CREB3L3Q68CJ9 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CREB3L3Q68CJ9 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CREB3L3Q68CJ9 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CREB3L3Q68CJ9 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CREB3L3Q68CJ9 AL627223.1-201ENST00000416693 442 ntBASIC19.21■□□□□ 0.67
CREB3L3Q68CJ9 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC19.21■□□□□ 0.67
CREB3L3Q68CJ9 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CREB3L3Q68CJ9 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
CREB3L3Q68CJ9 RARRES2P9-201ENST00000565168 469 ntBASIC19.21■□□□□ 0.67
CREB3L3Q68CJ9 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC19.21■□□□□ 0.67
CREB3L3Q68CJ9 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC19.21■□□□□ 0.67
CREB3L3Q68CJ9 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CREB3L3Q68CJ9 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CREB3L3Q68CJ9 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CREB3L3Q68CJ9 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CREB3L3Q68CJ9 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms