Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 SPDYE7P-202ENST00000420373 878 ntBASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 CNN2P2-201ENST00000443536 909 ntBASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 CNN2P3-201ENST00000450201 906 ntBASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 ALG1L8P-201ENST00000533887 760 ntBASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 SPTSSB-204ENST00000617024 1292 ntBASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 AL136317.3-201ENST00000618497 906 ntBASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.9■□□□□ 0.3
TTC39BQ5VTQ0 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TTC39BQ5VTQ0 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TTC39BQ5VTQ0 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.9■□□□□ 0.3
TTC39BQ5VTQ0 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
TTC39BQ5VTQ0 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TTC39BQ5VTQ0 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TTC39BQ5VTQ0 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
TTC39BQ5VTQ0 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TTC39BQ5VTQ0 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.9■□□□□ 0.3
TTC39BQ5VTQ0 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TTC39BQ5VTQ0 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
TTC39BQ5VTQ0 AL645939.2-201ENST00000427340 991 ntBASIC16.9■□□□□ 0.3
TTC39BQ5VTQ0 POU5F1P6-201ENST00000466990 990 ntBASIC16.9■□□□□ 0.3
TTC39BQ5VTQ0 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.9■□□□□ 0.3
TTC39BQ5VTQ0 AC109322.1-201ENST00000524499 1264 ntBASIC16.9■□□□□ 0.3
TTC39BQ5VTQ0 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TTC39BQ5VTQ0 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.9■□□□□ 0.3
TTC39BQ5VTQ0 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.9■□□□□ 0.3
TTC39BQ5VTQ0 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.9■□□□□ 0.3
TTC39BQ5VTQ0 PAUPAR-201ENST00000630360 2965 ntBASIC16.9■□□□□ 0.3
TTC39BQ5VTQ0 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TTC39BQ5VTQ0 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TTC39BQ5VTQ0 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TTC39BQ5VTQ0 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TTC39BQ5VTQ0 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TTC39BQ5VTQ0 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
TTC39BQ5VTQ0 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.9■□□□□ 0.3
TTC39BQ5VTQ0 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TTC39BQ5VTQ0 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.3
TTC39BQ5VTQ0 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TTC39BQ5VTQ0 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TTC39BQ5VTQ0 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.89■□□□□ 0.3
TTC39BQ5VTQ0 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
TTC39BQ5VTQ0 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TTC39BQ5VTQ0 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.89■□□□□ 0.29
TTC39BQ5VTQ0 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TTC39BQ5VTQ0 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.89■□□□□ 0.29
TTC39BQ5VTQ0 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TTC39BQ5VTQ0 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TTC39BQ5VTQ0 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TTC39BQ5VTQ0 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TTC39BQ5VTQ0 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TTC39BQ5VTQ0 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.89■□□□□ 0.29
TTC39BQ5VTQ0 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TTC39BQ5VTQ0 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TTC39BQ5VTQ0 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
TTC39BQ5VTQ0 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TTC39BQ5VTQ0 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TTC39BQ5VTQ0 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.89■□□□□ 0.29
TTC39BQ5VTQ0 FAM220BP-201ENST00000377689 816 ntBASIC16.89■□□□□ 0.29
TTC39BQ5VTQ0 SPDYE14P-201ENST00000442619 822 ntBASIC16.89■□□□□ 0.29
TTC39BQ5VTQ0 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.89■□□□□ 0.29
TTC39BQ5VTQ0 AC067863.1-201ENST00000494933 530 ntBASIC16.89■□□□□ 0.29
TTC39BQ5VTQ0 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TTC39BQ5VTQ0 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TTC39BQ5VTQ0 AC026150.2-201ENST00000564693 1156 ntBASIC16.89■□□□□ 0.29
TTC39BQ5VTQ0 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TTC39BQ5VTQ0 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.89■□□□□ 0.29
TTC39BQ5VTQ0 AC093028.1-201ENST00000622998 982 ntBASIC16.89■□□□□ 0.29
TTC39BQ5VTQ0 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.89■□□□□ 0.29
TTC39BQ5VTQ0 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TTC39BQ5VTQ0 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TTC39BQ5VTQ0 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TTC39BQ5VTQ0 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TTC39BQ5VTQ0 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TTC39BQ5VTQ0 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.89■□□□□ 0.29
TTC39BQ5VTQ0 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TTC39BQ5VTQ0 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.89■□□□□ 0.29
TTC39BQ5VTQ0 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.89■□□□□ 0.29
TTC39BQ5VTQ0 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.88■□□□□ 0.29
TTC39BQ5VTQ0 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TTC39BQ5VTQ0 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TTC39BQ5VTQ0 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms