Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 AC107918.2-201ENST00000530817 355 ntBASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 AC005412.3-201ENST00000580309 715 ntBASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 AC120114.3-201ENST00000611923 658 ntBASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 GGT4P-201ENST00000623672 1708 ntBASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 AC067930.6-201ENST00000623257 4947 ntBASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ATPAF1Q5TC12 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 AC006449.6-201ENST00000612330 2296 ntBASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 HCG4B-203ENST00000450128 991 ntBASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 MIR4751-201ENST00000578027 74 ntBASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 AP002414.2-201ENST00000591780 3365 ntBASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.13□□□□□ -0.15
ATPAF1Q5TC12 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATPAF1Q5TC12 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATPAF1Q5TC12 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ATPAF1Q5TC12 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
ATPAF1Q5TC12 AL353732.1-201ENST00000569618 1459 ntBASIC14.12□□□□□ -0.15
ATPAF1Q5TC12 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATPAF1Q5TC12 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.12□□□□□ -0.15
ATPAF1Q5TC12 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.12□□□□□ -0.15
ATPAF1Q5TC12 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
ATPAF1Q5TC12 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATPAF1Q5TC12 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.12□□□□□ -0.15
ATPAF1Q5TC12 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ATPAF1Q5TC12 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.12□□□□□ -0.15
ATPAF1Q5TC12 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ATPAF1Q5TC12 GGT3P-204ENST00000453783 1664 ntBASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms