Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
USH1GQ495M9 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
USH1GQ495M9 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USH1GQ495M9 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
USH1GQ495M9 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
USH1GQ495M9 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USH1GQ495M9 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USH1GQ495M9 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USH1GQ495M9 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.54■□□□□ 0.56
USH1GQ495M9 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
USH1GQ495M9 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
USH1GQ495M9 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USH1GQ495M9 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USH1GQ495M9 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USH1GQ495M9 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USH1GQ495M9 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USH1GQ495M9 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USH1GQ495M9 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USH1GQ495M9 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.53■□□□□ 0.56
USH1GQ495M9 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
USH1GQ495M9 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USH1GQ495M9 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
USH1GQ495M9 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.53■□□□□ 0.56
USH1GQ495M9 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.53■□□□□ 0.56
USH1GQ495M9 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USH1GQ495M9 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
USH1GQ495M9 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USH1GQ495M9 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USH1GQ495M9 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
USH1GQ495M9 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USH1GQ495M9 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USH1GQ495M9 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
USH1GQ495M9 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
USH1GQ495M9 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
USH1GQ495M9 SPDYE18-201ENST00000510091 1050 ntBASIC18.53■□□□□ 0.56
USH1GQ495M9 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
USH1GQ495M9 AC104794.3-201ENST00000566840 1248 ntBASIC18.53■□□□□ 0.56
USH1GQ495M9 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.53■□□□□ 0.56
USH1GQ495M9 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.53■□□□□ 0.56
USH1GQ495M9 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.53■□□□□ 0.56
USH1GQ495M9 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.53■□□□□ 0.56
USH1GQ495M9 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.53■□□□□ 0.56
USH1GQ495M9 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.53■□□□□ 0.56
USH1GQ495M9 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
USH1GQ495M9 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.53■□□□□ 0.56
USH1GQ495M9 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.53■□□□□ 0.56
USH1GQ495M9 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USH1GQ495M9 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
USH1GQ495M9 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
USH1GQ495M9 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.53■□□□□ 0.56
USH1GQ495M9 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
USH1GQ495M9 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USH1GQ495M9 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USH1GQ495M9 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.53■□□□□ 0.56
USH1GQ495M9 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USH1GQ495M9 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USH1GQ495M9 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USH1GQ495M9 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.52■□□□□ 0.56
USH1GQ495M9 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.52■□□□□ 0.56
USH1GQ495M9 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
USH1GQ495M9 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
USH1GQ495M9 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.52■□□□□ 0.56
USH1GQ495M9 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.52■□□□□ 0.56
USH1GQ495M9 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
USH1GQ495M9 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USH1GQ495M9 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
USH1GQ495M9 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.52■□□□□ 0.56
USH1GQ495M9 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.52■□□□□ 0.56
USH1GQ495M9 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.52■□□□□ 0.56
USH1GQ495M9 GNAQP1-201ENST00000444815 1067 ntBASIC18.52■□□□□ 0.56
USH1GQ495M9 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.52■□□□□ 0.56
USH1GQ495M9 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.52■□□□□ 0.56
USH1GQ495M9 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.52■□□□□ 0.56
USH1GQ495M9 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USH1GQ495M9 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.52■□□□□ 0.56
USH1GQ495M9 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.52■□□□□ 0.56
USH1GQ495M9 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.52■□□□□ 0.56
USH1GQ495M9 AL109936.8-201ENST00000641772 604 ntBASIC18.52■□□□□ 0.56
USH1GQ495M9 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
USH1GQ495M9 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
USH1GQ495M9 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.52■□□□□ 0.56
USH1GQ495M9 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.52■□□□□ 0.56
USH1GQ495M9 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USH1GQ495M9 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.52■□□□□ 0.55
USH1GQ495M9 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
USH1GQ495M9 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.52■□□□□ 0.55
USH1GQ495M9 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.52■□□□□ 0.55
USH1GQ495M9 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
USH1GQ495M9 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
USH1GQ495M9 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.55
USH1GQ495M9 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.55
USH1GQ495M9 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USH1GQ495M9 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.51■□□□□ 0.55
USH1GQ495M9 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
USH1GQ495M9 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.51■□□□□ 0.55
USH1GQ495M9 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USH1GQ495M9 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.51■□□□□ 0.55
USH1GQ495M9 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
USH1GQ495M9 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
USH1GQ495M9 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms