Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.14■□□□□ 0.01
RFX4Q33E94 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
RFX4Q33E94 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.14■□□□□ 0.01
RFX4Q33E94 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.14■□□□□ 0.01
RFX4Q33E94 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.14■□□□□ 0.01
RFX4Q33E94 AL732292.2-201ENST00000609649 430 ntBASIC15.14■□□□□ 0.01
RFX4Q33E94 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.14■□□□□ 0.01
RFX4Q33E94 AF228730.7-201ENST00000641842 219 ntBASIC15.14■□□□□ 0.01
RFX4Q33E94 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.14■□□□□ 0.01
RFX4Q33E94 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RFX4Q33E94 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RFX4Q33E94 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RFX4Q33E94 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.14■□□□□ 0.01
RFX4Q33E94 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.14■□□□□ 0.01
RFX4Q33E94 AC087481.3-201ENST00000602886 1894 ntBASIC15.14■□□□□ 0.01
RFX4Q33E94 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
RFX4Q33E94 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RFX4Q33E94 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.14■□□□□ 0.01
RFX4Q33E94 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RFX4Q33E94 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RFX4Q33E94 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.14■□□□□ 0.01
RFX4Q33E94 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFX4Q33E94 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.13■□□□□ 0.01
RFX4Q33E94 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFX4Q33E94 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFX4Q33E94 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFX4Q33E94 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFX4Q33E94 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.13■□□□□ 0.01
RFX4Q33E94 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFX4Q33E94 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RFX4Q33E94 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFX4Q33E94 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RFX4Q33E94 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFX4Q33E94 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RFX4Q33E94 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
RFX4Q33E94 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.13■□□□□ 0.01
RFX4Q33E94 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.13■□□□□ 0.01
RFX4Q33E94 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.13■□□□□ 0.01
RFX4Q33E94 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.13■□□□□ 0.01
RFX4Q33E94 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RFX4Q33E94 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.13■□□□□ 0.01
RFX4Q33E94 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.13■□□□□ 0.01
RFX4Q33E94 AC004706.3-202ENST00000621574 984 ntBASIC15.13■□□□□ 0.01
RFX4Q33E94 REXO1L3P-201ENST00000622202 1288 ntBASIC15.13■□□□□ 0.01
RFX4Q33E94 LINC01101-201ENST00000622953 1884 ntBASIC15.13■□□□□ 0.01
RFX4Q33E94 AC093458.2-201ENST00000623150 629 ntBASIC15.13■□□□□ 0.01
RFX4Q33E94 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.13■□□□□ 0.01
RFX4Q33E94 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.13■□□□□ 0.01
RFX4Q33E94 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFX4Q33E94 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFX4Q33E94 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RFX4Q33E94 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RFX4Q33E94 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
RFX4Q33E94 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RFX4Q33E94 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RFX4Q33E94 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.13■□□□□ 0.01
RFX4Q33E94 AC007292.2-201ENST00000593524 1812 ntBASIC15.13■□□□□ 0.01
RFX4Q33E94 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFX4Q33E94 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFX4Q33E94 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.12■□□□□ 0.01
RFX4Q33E94 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFX4Q33E94 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RFX4Q33E94 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFX4Q33E94 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFX4Q33E94 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFX4Q33E94 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RFX4Q33E94 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFX4Q33E94 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.12■□□□□ 0.01
RFX4Q33E94 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFX4Q33E94 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFX4Q33E94 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RFX4Q33E94 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RFX4Q33E94 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
RFX4Q33E94 PTCHD3P3-201ENST00000403073 906 ntBASIC15.12■□□□□ 0.01
RFX4Q33E94 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RFX4Q33E94 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.12■□□□□ 0.01
RFX4Q33E94 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.12■□□□□ 0.01
RFX4Q33E94 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.12■□□□□ 0.01
RFX4Q33E94 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFX4Q33E94 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
RFX4Q33E94 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.12■□□□□ 0.01
RFX4Q33E94 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFX4Q33E94 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.12■□□□□ 0.01
RFX4Q33E94 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RFX4Q33E94 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.12■□□□□ 0.01
RFX4Q33E94 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.12■□□□□ 0.01
RFX4Q33E94 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.12■□□□□ 0.01
RFX4Q33E94 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.12■□□□□ 0.01
RFX4Q33E94 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFX4Q33E94 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
RFX4Q33E94 AL355877.3-201ENST00000622820 899 ntBASIC15.12■□□□□ 0.01
RFX4Q33E94 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.12■□□□□ 0.01
RFX4Q33E94 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFX4Q33E94 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFX4Q33E94 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RFX4Q33E94 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RFX4Q33E94 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
RFX4Q33E94 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
RFX4Q33E94 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RFX4Q33E94 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms