Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 SDHAP3-202ENST00000515467 728 ntBASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 MIR4538-201ENST00000581377 78 ntBASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 AL033527.5-202ENST00000641632 1098 ntBASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 KRT8P12-202ENST00000472924 1397 ntBASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.28■□□□□ 0.36
CTC1Q2NKJ3 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTC1Q2NKJ3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CTC1Q2NKJ3 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTC1Q2NKJ3 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTC1Q2NKJ3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTC1Q2NKJ3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTC1Q2NKJ3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTC1Q2NKJ3 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.27■□□□□ 0.36
CTC1Q2NKJ3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.27■□□□□ 0.36
CTC1Q2NKJ3 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CTC1Q2NKJ3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTC1Q2NKJ3 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTC1Q2NKJ3 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTC1Q2NKJ3 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTC1Q2NKJ3 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
CTC1Q2NKJ3 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.27■□□□□ 0.36
CTC1Q2NKJ3 SPDYE17-201ENST00000412399 783 ntBASIC17.27■□□□□ 0.36
CTC1Q2NKJ3 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.27■□□□□ 0.36
CTC1Q2NKJ3 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CTC1Q2NKJ3 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.27■□□□□ 0.36
CTC1Q2NKJ3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.27■□□□□ 0.36
CTC1Q2NKJ3 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CTC1Q2NKJ3 AC093726.1-201ENST00000608064 963 ntBASIC17.27■□□□□ 0.36
CTC1Q2NKJ3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CTC1Q2NKJ3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTC1Q2NKJ3 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
CTC1Q2NKJ3 AC016396.2-201ENST00000562575 1417 ntBASIC17.27■□□□□ 0.35
CTC1Q2NKJ3 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CTC1Q2NKJ3 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CTC1Q2NKJ3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CTC1Q2NKJ3 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CTC1Q2NKJ3 AC103702.1-201ENST00000548801 2630 ntBASIC17.27■□□□□ 0.35
CTC1Q2NKJ3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CTC1Q2NKJ3 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CTC1Q2NKJ3 AC093525.9-201ENST00000624961 1746 ntBASIC17.27■□□□□ 0.35
CTC1Q2NKJ3 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.35
CTC1Q2NKJ3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 LINC00554-201ENST00000564841 3011 ntBASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 RNF216P1-203ENST00000404404 2427 ntBASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 ANKRD19P-201ENST00000338192 862 ntBASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 BOLA2P3-201ENST00000404566 256 ntBASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 ACTBP11-201ENST00000436287 1126 ntBASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 AC008735.3-201ENST00000596646 500 ntBASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.26■□□□□ 0.35
CTC1Q2NKJ3 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms