Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.75■□□□□ 0.59
SHROOM1Q2M3G4 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.75■□□□□ 0.59
SHROOM1Q2M3G4 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SHROOM1Q2M3G4 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.75■□□□□ 0.59
SHROOM1Q2M3G4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
SHROOM1Q2M3G4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHROOM1Q2M3G4 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHROOM1Q2M3G4 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHROOM1Q2M3G4 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHROOM1Q2M3G4 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.75■□□□□ 0.59
SHROOM1Q2M3G4 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SHROOM1Q2M3G4 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18.74■□□□□ 0.59
SHROOM1Q2M3G4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SHROOM1Q2M3G4 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SHROOM1Q2M3G4 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.74■□□□□ 0.59
SHROOM1Q2M3G4 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SHROOM1Q2M3G4 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHROOM1Q2M3G4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHROOM1Q2M3G4 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHROOM1Q2M3G4 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SHROOM1Q2M3G4 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SHROOM1Q2M3G4 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.74■□□□□ 0.59
SHROOM1Q2M3G4 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.74■□□□□ 0.59
SHROOM1Q2M3G4 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC18.74■□□□□ 0.59
SHROOM1Q2M3G4 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.74■□□□□ 0.59
SHROOM1Q2M3G4 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.74■□□□□ 0.59
SHROOM1Q2M3G4 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.74■□□□□ 0.59
SHROOM1Q2M3G4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.74■□□□□ 0.59
SHROOM1Q2M3G4 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.74■□□□□ 0.59
SHROOM1Q2M3G4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.74■□□□□ 0.59
SHROOM1Q2M3G4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHROOM1Q2M3G4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHROOM1Q2M3G4 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SHROOM1Q2M3G4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SHROOM1Q2M3G4 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SHROOM1Q2M3G4 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHROOM1Q2M3G4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHROOM1Q2M3G4 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHROOM1Q2M3G4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHROOM1Q2M3G4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SHROOM1Q2M3G4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SHROOM1Q2M3G4 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHROOM1Q2M3G4 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHROOM1Q2M3G4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHROOM1Q2M3G4 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHROOM1Q2M3G4 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SHROOM1Q2M3G4 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SHROOM1Q2M3G4 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.73■□□□□ 0.59
SHROOM1Q2M3G4 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHROOM1Q2M3G4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.73■□□□□ 0.59
SHROOM1Q2M3G4 NKILA-202ENST00000614771 2598 ntBASIC18.73■□□□□ 0.59
SHROOM1Q2M3G4 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHROOM1Q2M3G4 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SHROOM1Q2M3G4 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SHROOM1Q2M3G4 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHROOM1Q2M3G4 MEP1AP4-201ENST00000423244 1087 ntBASIC18.73■□□□□ 0.59
SHROOM1Q2M3G4 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SHROOM1Q2M3G4 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHROOM1Q2M3G4 AC011495.1-201ENST00000498085 584 ntBASIC18.73■□□□□ 0.59
SHROOM1Q2M3G4 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.73■□□□□ 0.59
SHROOM1Q2M3G4 AC092552.1-201ENST00000547243 906 ntBASIC18.73■□□□□ 0.59
SHROOM1Q2M3G4 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC18.73■□□□□ 0.59
SHROOM1Q2M3G4 AC008735.3-201ENST00000596646 500 ntBASIC18.73■□□□□ 0.59
SHROOM1Q2M3G4 TMEM261P1-201ENST00000604899 340 ntBASIC18.73■□□□□ 0.59
SHROOM1Q2M3G4 AL512343.1-201ENST00000605837 169 ntBASIC18.73■□□□□ 0.59
SHROOM1Q2M3G4 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHROOM1Q2M3G4 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SHROOM1Q2M3G4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHROOM1Q2M3G4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.73■□□□□ 0.59
SHROOM1Q2M3G4 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SHROOM1Q2M3G4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
SHROOM1Q2M3G4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
SHROOM1Q2M3G4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHROOM1Q2M3G4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SHROOM1Q2M3G4 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
SHROOM1Q2M3G4 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHROOM1Q2M3G4 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
SHROOM1Q2M3G4 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHROOM1Q2M3G4 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.72■□□□□ 0.59
SHROOM1Q2M3G4 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHROOM1Q2M3G4 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHROOM1Q2M3G4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHROOM1Q2M3G4 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHROOM1Q2M3G4 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.72■□□□□ 0.59
SHROOM1Q2M3G4 ANKRD19P-201ENST00000338192 862 ntBASIC18.72■□□□□ 0.59
SHROOM1Q2M3G4 MIR658-201ENST00000385210 100 ntBASIC18.72■□□□□ 0.59
SHROOM1Q2M3G4 AC022210.1-201ENST00000449856 793 ntBASIC18.72■□□□□ 0.59
SHROOM1Q2M3G4 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.72■□□□□ 0.59
SHROOM1Q2M3G4 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.72■□□□□ 0.59
SHROOM1Q2M3G4 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.72■□□□□ 0.59
SHROOM1Q2M3G4 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.72■□□□□ 0.59
SHROOM1Q2M3G4 AC243562.2-201ENST00000561247 970 ntBASIC18.72■□□□□ 0.59
SHROOM1Q2M3G4 WNT11-204ENST00000621122 789 ntTSL 5 BASIC18.72■□□□□ 0.59
SHROOM1Q2M3G4 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.72■□□□□ 0.59
SHROOM1Q2M3G4 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.72■□□□□ 0.59
SHROOM1Q2M3G4 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHROOM1Q2M3G4 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.72■□□□□ 0.59
SHROOM1Q2M3G4 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHROOM1Q2M3G4 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SHROOM1Q2M3G4 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms